fast.genomicscompare 6,575 genera of bacteria & archaea

 

Borrelia sp021165755 RT5S

Genome identifier: GCF_021165755.1

NCBI assembly name: ASM2116575v1

GTDB taxonomy: Bacteria, Spirochaetota, Spirochaetia, Borreliales, Borreliaceae, Borrelia, Borrelia sp021165755

NCBI taxonomy: Bacteria, Spirochaetota, Spirochaetia, Spirochaetales, Borreliaceae, Borrelia

Scaffolds: 7

Genes: 1,162 Protein-coding: 1,119 RNAs: 37 pseudogenes: 6

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP088936.1 Borrelia sp. RT5S chromosome, complete genome 942,663
NZ_CP088937.1 Borrelia sp. RT5S plasmid p-lp25, complete sequence 25,456
NZ_CP088938.1 Borrelia sp. RT5S plasmid p-lp27, complete sequence 27,771
NZ_CP088939.1 Borrelia sp. RT5S plasmid p-lp27-B, complete sequence 27,011
NZ_CP088940.1 Borrelia sp. RT5S plasmid p-lp30, complete sequence 30,932
NZ_CP088941.1 Borrelia sp. RT5S plasmid p-lp44, complete sequence 44,552
NZ_CP088942.1 Borrelia sp. RT5S plasmid p-lp83, complete sequence 83,220

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory