fast.genomicscompare 6,575 genera of bacteria & archaea

 

Tabrizicola_B rongguiensis J26

Genome identifier: GCF_021491355.1

NCBI assembly name: 26

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Tabrizicola_B, Tabrizicola_B rongguiensis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Tabrizicola, Tabrizicola rongguiensis

Scaffolds: 13

Genes: 4,089 Protein-coding: 4,002 RNAs: 52 pseudogenes: 35

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAKENF010000001.1 Tabrizicola rongguiensis strain J26 NODE_1_length_1199516_cov_184.190076, whole genome shotgun sequence 1,199,516
NZ_JAKENF010000002.1 Tabrizicola rongguiensis strain J26 NODE_2_length_1159066_cov_174.646382, whole genome shotgun sequence 1,159,066
NZ_JAKENF010000003.1 Tabrizicola rongguiensis strain J26 NODE_3_length_929116_cov_172.328837, whole genome shotgun sequence 929,116
NZ_JAKENF010000004.1 Tabrizicola rongguiensis strain J26 NODE_4_length_452799_cov_211.999130, whole genome shotgun sequence 452,799
NZ_JAKENF010000005.1 Tabrizicola rongguiensis strain J26 NODE_5_length_266069_cov_177.886465, whole genome shotgun sequence 266,069
NZ_JAKENF010000006.1 Tabrizicola rongguiensis strain J26 NODE_6_length_70157_cov_208.748623, whole genome shotgun sequence 70,157
NZ_JAKENF010000007.1 Tabrizicola rongguiensis strain J26 NODE_7_length_57832_cov_303.373616, whole genome shotgun sequence 57,832
NZ_JAKENF010000008.1 Tabrizicola rongguiensis strain J26 NODE_8_length_45066_cov_180.812307, whole genome shotgun sequence 45,066
NZ_JAKENF010000009.1 Tabrizicola rongguiensis strain J26 NODE_9_length_7071_cov_95.492255, whole genome shotgun sequence 7,071
NZ_JAKENF010000010.1 Tabrizicola rongguiensis strain J26 NODE_10_length_5733_cov_330.482783, whole genome shotgun sequence 5,733
NZ_JAKENF010000011.1 Tabrizicola rongguiensis strain J26 NODE_11_length_3230_cov_376.725966, whole genome shotgun sequence 3,230
NZ_JAKENF010000012.1 Tabrizicola rongguiensis strain J26 NODE_12_length_1749_cov_174.663636, whole genome shotgun sequence 1,749
NZ_JAKENF010000013.1 Tabrizicola rongguiensis strain J26 NODE_13_length_1068_cov_524.512900, whole genome shotgun sequence 1,068

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory