fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA1712 sp018056665 An861

Genome identifier: GCF_021531795.1

NCBI assembly name: ASM2153179v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, UBA1712, UBA1712 sp018056665

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Lacrimispora, Lacrimispora saccharolytica

Scaffolds: 28

Genes: 1,985 Protein-coding: 1,922 RNAs: 48 pseudogenes: 15

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JADYUL010000001.1 Lacrimispora saccharolytica strain An861 An861_NODE_1_length_442649_cov_25.240125_pilon, whole genome shotgun sequence 442,649
NZ_JADYUL010000002.1 Lacrimispora saccharolytica strain An861 An861_NODE_2_length_373986_cov_24.726210_pilon, whole genome shotgun sequence 373,986
NZ_JADYUL010000003.1 Lacrimispora saccharolytica strain An861 An861_NODE_3_length_280071_cov_25.529422_pilon, whole genome shotgun sequence 280,071
NZ_JADYUL010000004.1 Lacrimispora saccharolytica strain An861 An861_NODE_4_length_138532_cov_26.483233_pilon, whole genome shotgun sequence 138,532
NZ_JADYUL010000005.1 Lacrimispora saccharolytica strain An861 An861_NODE_5_length_131374_cov_24.590624_pilon, whole genome shotgun sequence 131,374
NZ_JADYUL010000006.1 Lacrimispora saccharolytica strain An861 An861_NODE_6_length_129877_cov_21.916208_pilon, whole genome shotgun sequence 129,877
NZ_JADYUL010000007.1 Lacrimispora saccharolytica strain An861 An861_NODE_7_length_103313_cov_16.141310_pilon, whole genome shotgun sequence 103,313
NZ_JADYUL010000008.1 Lacrimispora saccharolytica strain An861 An861_NODE_8_length_92973_cov_24.915990_pilon, whole genome shotgun sequence 92,973
NZ_JADYUL010000009.1 Lacrimispora saccharolytica strain An861 An861_NODE_9_length_83618_cov_24.638145_pilon, whole genome shotgun sequence 83,618
NZ_JADYUL010000010.1 Lacrimispora saccharolytica strain An861 An861_NODE_10_length_75318_cov_27.777629_pilon, whole genome shotgun sequence 75,318
NZ_JADYUL010000011.1 Lacrimispora saccharolytica strain An861 An861_NODE_11_length_74447_cov_25.868169_pilon, whole genome shotgun sequence 74,447
NZ_JADYUL010000012.1 Lacrimispora saccharolytica strain An861 An861_NODE_12_length_73257_cov_24.418582_pilon, whole genome shotgun sequence 73,257
NZ_JADYUL010000013.1 Lacrimispora saccharolytica strain An861 An861_NODE_13_length_36390_cov_23.745091_pilon, whole genome shotgun sequence 36,390
NZ_JADYUL010000014.1 Lacrimispora saccharolytica strain An861 An861_NODE_14_length_33373_cov_23.036283_pilon, whole genome shotgun sequence 33,373
NZ_JADYUL010000015.1 Lacrimispora saccharolytica strain An861 An861_NODE_15_length_29126_cov_12.875547_pilon, whole genome shotgun sequence 29,126
NZ_JADYUL010000016.1 Lacrimispora saccharolytica strain An861 An861_NODE_16_length_21776_cov_14.328018_pilon, whole genome shotgun sequence 21,776
NZ_JADYUL010000017.1 Lacrimispora saccharolytica strain An861 An861_NODE_17_length_10102_cov_14.675347_pilon, whole genome shotgun sequence 10,102
NZ_JADYUL010000018.1 Lacrimispora saccharolytica strain An861 An861_NODE_18_length_4926_cov_100.133897_pilon, whole genome shotgun sequence 4,926
NZ_JADYUL010000019.1 Lacrimispora saccharolytica strain An861 An861_NODE_19_length_2538_cov_21.624237_pilon, whole genome shotgun sequence 2,538
NZ_JADYUL010000020.1 Lacrimispora saccharolytica strain An861 An861_NODE_20_length_2322_cov_34.822559_pilon, whole genome shotgun sequence 2,322
NZ_JADYUL010000021.1 Lacrimispora saccharolytica strain An861 An861_NODE_21_length_1780_cov_73.697237_pilon, whole genome shotgun sequence 1,780
NZ_JADYUL010000022.1 Lacrimispora saccharolytica strain An861 An861_NODE_22_length_1774_cov_47.360472_pilon, whole genome shotgun sequence 1,774
NZ_JADYUL010000023.1 Lacrimispora saccharolytica strain An861 An861_NODE_23_length_1598_cov_8.230415_pilon, whole genome shotgun sequence 1,598
NZ_JADYUL010000024.1 Lacrimispora saccharolytica strain An861 An861_NODE_24_length_782_cov_110.477952_pilon, whole genome shotgun sequence 782
NZ_JADYUL010000025.1 Lacrimispora saccharolytica strain An861 An861_NODE_25_length_629_cov_111.523636_pilon, whole genome shotgun sequence 629
NZ_JADYUL010000026.1 Lacrimispora saccharolytica strain An861 An861_NODE_26_length_588_cov_18.489194_pilon, whole genome shotgun sequence 588
NZ_JADYUL010000027.1 Lacrimispora saccharolytica strain An861 An861_NODE_27_length_521_cov_21.185520_pilon, whole genome shotgun sequence 521
NZ_JADYUL010000028.1 Lacrimispora saccharolytica strain An861 An861_NODE_28_length_494_cov_126.238554_pilon, whole genome shotgun sequence 494

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory