fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAFBIX01 sp021531895 ET55

Genome identifier: GCF_021531895.1

NCBI assembly name: ASM2153189v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, JAFBIX01, JAFBIX01 sp021531895

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Faecalicatena, Faecalicatena contorta

Scaffolds: 93

Genes: 2,715 Protein-coding: 2,600 RNAs: 70 pseudogenes: 45

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAFBIX010000001.1 Faecalicatena contorta strain ET55 Prase_15_NODE_1_length_132157_cov_17.7037, whole genome shotgun sequence 132,157
NZ_JAFBIX010000002.1 Faecalicatena contorta strain ET55 Prase_15_NODE_2_length_125303_cov_20.1802, whole genome shotgun sequence 125,303
NZ_JAFBIX010000003.1 Faecalicatena contorta strain ET55 Prase_15_NODE_3_length_117584_cov_19.7994, whole genome shotgun sequence 117,584
NZ_JAFBIX010000004.1 Faecalicatena contorta strain ET55 Prase_15_NODE_4_length_115531_cov_18.456, whole genome shotgun sequence 115,531
NZ_JAFBIX010000005.1 Faecalicatena contorta strain ET55 Prase_15_NODE_5_length_115405_cov_19.8301, whole genome shotgun sequence 115,405
NZ_JAFBIX010000006.1 Faecalicatena contorta strain ET55 Prase_15_NODE_6_length_108814_cov_19.2708, whole genome shotgun sequence 108,814
NZ_JAFBIX010000007.1 Faecalicatena contorta strain ET55 Prase_15_NODE_7_length_103656_cov_19.4931, whole genome shotgun sequence 103,656
NZ_JAFBIX010000008.1 Faecalicatena contorta strain ET55 Prase_15_NODE_8_length_103138_cov_19.7425, whole genome shotgun sequence 103,138
NZ_JAFBIX010000009.1 Faecalicatena contorta strain ET55 Prase_15_NODE_9_length_101930_cov_18.8158, whole genome shotgun sequence 101,930
NZ_JAFBIX010000010.1 Faecalicatena contorta strain ET55 Prase_15_NODE_10_length_100870_cov_19.2292, whole genome shotgun sequence 100,870
NZ_JAFBIX010000011.1 Faecalicatena contorta strain ET55 Prase_15_NODE_11_length_99417_cov_20.7995, whole genome shotgun sequence 99,417
NZ_JAFBIX010000012.1 Faecalicatena contorta strain ET55 Prase_15_NODE_12_length_95021_cov_19.763, whole genome shotgun sequence 95,021
NZ_JAFBIX010000013.1 Faecalicatena contorta strain ET55 Prase_15_NODE_13_length_94028_cov_19.1606, whole genome shotgun sequence 94,028
NZ_JAFBIX010000014.1 Faecalicatena contorta strain ET55 Prase_15_NODE_14_length_93675_cov_19.1413, whole genome shotgun sequence 93,675
NZ_JAFBIX010000015.1 Faecalicatena contorta strain ET55 Prase_15_NODE_15_length_90171_cov_19.1451, whole genome shotgun sequence 90,171
NZ_JAFBIX010000016.1 Faecalicatena contorta strain ET55 Prase_15_NODE_16_length_71892_cov_19.6658, whole genome shotgun sequence 71,892
NZ_JAFBIX010000017.1 Faecalicatena contorta strain ET55 Prase_15_NODE_17_length_71706_cov_19.7584, whole genome shotgun sequence 71,706
NZ_JAFBIX010000018.1 Faecalicatena contorta strain ET55 Prase_15_NODE_18_length_70000_cov_18.7055, whole genome shotgun sequence 70,000
NZ_JAFBIX010000019.1 Faecalicatena contorta strain ET55 Prase_15_NODE_19_length_69436_cov_18.118, whole genome shotgun sequence 69,436
NZ_JAFBIX010000020.1 Faecalicatena contorta strain ET55 Prase_15_NODE_20_length_57216_cov_20.4592, whole genome shotgun sequence 57,216
NZ_JAFBIX010000021.1 Faecalicatena contorta strain ET55 Prase_15_NODE_21_length_56954_cov_20.5809, whole genome shotgun sequence 56,954
NZ_JAFBIX010000022.1 Faecalicatena contorta strain ET55 Prase_15_NODE_22_length_56520_cov_18.1649, whole genome shotgun sequence 56,520
NZ_JAFBIX010000023.1 Faecalicatena contorta strain ET55 Prase_15_NODE_23_length_51747_cov_17.7928, whole genome shotgun sequence 51,747
NZ_JAFBIX010000024.1 Faecalicatena contorta strain ET55 Prase_15_NODE_24_length_47873_cov_18.6627, whole genome shotgun sequence 47,873
NZ_JAFBIX010000025.1 Faecalicatena contorta strain ET55 Prase_15_NODE_25_length_46521_cov_18.4356, whole genome shotgun sequence 46,521
NZ_JAFBIX010000026.1 Faecalicatena contorta strain ET55 Prase_15_NODE_26_length_38480_cov_21.8398, whole genome shotgun sequence 38,480
NZ_JAFBIX010000027.1 Faecalicatena contorta strain ET55 Prase_15_NODE_27_length_34050_cov_19.2421, whole genome shotgun sequence 34,050
NZ_JAFBIX010000028.1 Faecalicatena contorta strain ET55 Prase_15_NODE_28_length_33402_cov_21.1577, whole genome shotgun sequence 33,402
NZ_JAFBIX010000029.1 Faecalicatena contorta strain ET55 Prase_15_NODE_29_length_33385_cov_18.5605, whole genome shotgun sequence 33,385
NZ_JAFBIX010000030.1 Faecalicatena contorta strain ET55 Prase_15_NODE_30_length_32960_cov_17.7575, whole genome shotgun sequence 32,960
NZ_JAFBIX010000031.1 Faecalicatena contorta strain ET55 Prase_15_NODE_31_length_30940_cov_19.9403, whole genome shotgun sequence 30,940
NZ_JAFBIX010000032.1 Faecalicatena contorta strain ET55 Prase_15_NODE_32_length_30751_cov_18.7683, whole genome shotgun sequence 30,751
NZ_JAFBIX010000033.1 Faecalicatena contorta strain ET55 Prase_15_NODE_33_length_26922_cov_20.7714, whole genome shotgun sequence 26,922
NZ_JAFBIX010000034.1 Faecalicatena contorta strain ET55 Prase_15_NODE_34_length_21514_cov_21.0378, whole genome shotgun sequence 21,514
NZ_JAFBIX010000035.1 Faecalicatena contorta strain ET55 Prase_15_NODE_35_length_20983_cov_19.2768, whole genome shotgun sequence 20,983
NZ_JAFBIX010000036.1 Faecalicatena contorta strain ET55 Prase_15_NODE_36_length_19953_cov_19.4283, whole genome shotgun sequence 19,953
NZ_JAFBIX010000037.1 Faecalicatena contorta strain ET55 Prase_15_NODE_37_length_17432_cov_19.3345, whole genome shotgun sequence 17,432
NZ_JAFBIX010000038.1 Faecalicatena contorta strain ET55 Prase_15_NODE_38_length_15904_cov_15.98, whole genome shotgun sequence 15,904
NZ_JAFBIX010000039.1 Faecalicatena contorta strain ET55 Prase_15_NODE_39_length_13043_cov_15.3923, whole genome shotgun sequence 13,043
NZ_JAFBIX010000040.1 Faecalicatena contorta strain ET55 Prase_15_NODE_40_length_12688_cov_17.5231, whole genome shotgun sequence 12,688
NZ_JAFBIX010000041.1 Faecalicatena contorta strain ET55 Prase_15_NODE_41_length_12142_cov_16.8925, whole genome shotgun sequence 12,142
NZ_JAFBIX010000042.1 Faecalicatena contorta strain ET55 Prase_15_NODE_42_length_11465_cov_17.423, whole genome shotgun sequence 11,465
NZ_JAFBIX010000043.1 Faecalicatena contorta strain ET55 Prase_15_NODE_43_length_11327_cov_17.9581, whole genome shotgun sequence 11,327
NZ_JAFBIX010000044.1 Faecalicatena contorta strain ET55 Prase_15_NODE_44_length_9985_cov_10.6512, whole genome shotgun sequence 9,985
NZ_JAFBIX010000045.1 Faecalicatena contorta strain ET55 Prase_15_NODE_45_length_9293_cov_16.0301, whole genome shotgun sequence 9,293
NZ_JAFBIX010000046.1 Faecalicatena contorta strain ET55 Prase_15_NODE_46_length_9264_cov_12.0021, whole genome shotgun sequence 9,264
NZ_JAFBIX010000047.1 Faecalicatena contorta strain ET55 Prase_15_NODE_47_length_9089_cov_15.9429, whole genome shotgun sequence 9,089
NZ_JAFBIX010000048.1 Faecalicatena contorta strain ET55 Prase_15_NODE_48_length_8740_cov_18.2528, whole genome shotgun sequence 8,740
NZ_JAFBIX010000049.1 Faecalicatena contorta strain ET55 Prase_15_NODE_49_length_6687_cov_15.4377, whole genome shotgun sequence 6,687
NZ_JAFBIX010000050.1 Faecalicatena contorta strain ET55 Prase_15_NODE_50_length_6654_cov_17.2389, whole genome shotgun sequence 6,654
NZ_JAFBIX010000051.1 Faecalicatena contorta strain ET55 Prase_15_NODE_51_length_5876_cov_15.9856, whole genome shotgun sequence 5,876
NZ_JAFBIX010000052.1 Faecalicatena contorta strain ET55 Prase_15_NODE_52_length_5770_cov_19.631, whole genome shotgun sequence 5,770
NZ_JAFBIX010000053.1 Faecalicatena contorta strain ET55 Prase_15_NODE_53_length_5113_cov_11.8418, whole genome shotgun sequence 5,113
NZ_JAFBIX010000054.1 Faecalicatena contorta strain ET55 Prase_15_NODE_54_length_5086_cov_22.045, whole genome shotgun sequence 5,086
NZ_JAFBIX010000055.1 Faecalicatena contorta strain ET55 Prase_15_NODE_55_length_4495_cov_14.4192, whole genome shotgun sequence 4,495
NZ_JAFBIX010000056.1 Faecalicatena contorta strain ET55 Prase_15_NODE_56_length_4112_cov_14.056, whole genome shotgun sequence 4,112
NZ_JAFBIX010000057.1 Faecalicatena contorta strain ET55 Prase_15_NODE_57_length_3440_cov_10.5002, whole genome shotgun sequence 3,440
NZ_JAFBIX010000058.1 Faecalicatena contorta strain ET55 Prase_15_NODE_58_length_3290_cov_71.4407, whole genome shotgun sequence 3,290
NZ_JAFBIX010000059.1 Faecalicatena contorta strain ET55 Prase_15_NODE_59_length_2652_cov_17.2004, whole genome shotgun sequence 2,652
NZ_JAFBIX010000060.1 Faecalicatena contorta strain ET55 Prase_15_NODE_60_length_2563_cov_78.2254, whole genome shotgun sequence 2,563
NZ_JAFBIX010000061.1 Faecalicatena contorta strain ET55 Prase_15_NODE_61_length_2540_cov_9.06755, whole genome shotgun sequence 2,540
NZ_JAFBIX010000062.1 Faecalicatena contorta strain ET55 Prase_15_NODE_62_length_2365_cov_11.8874, whole genome shotgun sequence 2,365
NZ_JAFBIX010000063.1 Faecalicatena contorta strain ET55 Prase_15_NODE_63_length_2274_cov_6.16302, whole genome shotgun sequence 2,274
NZ_JAFBIX010000064.1 Faecalicatena contorta strain ET55 Prase_15_NODE_64_length_2022_cov_3.46332, whole genome shotgun sequence 2,022
NZ_JAFBIX010000065.1 Faecalicatena contorta strain ET55 Prase_15_NODE_65_length_1913_cov_13.5403, whole genome shotgun sequence 1,913
NZ_JAFBIX010000066.1 Faecalicatena contorta strain ET55 Prase_15_NODE_66_length_1798_cov_94.4357, whole genome shotgun sequence 1,798
NZ_JAFBIX010000067.1 Faecalicatena contorta strain ET55 Prase_15_NODE_67_length_1796_cov_3.69143, whole genome shotgun sequence 1,796
NZ_JAFBIX010000068.1 Faecalicatena contorta strain ET55 Prase_15_NODE_68_length_1683_cov_62.3297, whole genome shotgun sequence 1,683
NZ_JAFBIX010000069.1 Faecalicatena contorta strain ET55 Prase_15_NODE_69_length_1645_cov_10.6818, whole genome shotgun sequence 1,645
NZ_JAFBIX010000070.1 Faecalicatena contorta strain ET55 Prase_15_NODE_70_length_1644_cov_10.3678, whole genome shotgun sequence 1,644
NZ_JAFBIX010000071.1 Faecalicatena contorta strain ET55 Prase_15_NODE_71_length_1528_cov_64.4154, whole genome shotgun sequence 1,528
NZ_JAFBIX010000072.1 Faecalicatena contorta strain ET55 Prase_15_NODE_72_length_1496_cov_132.721, whole genome shotgun sequence 1,496
NZ_JAFBIX010000073.1 Faecalicatena contorta strain ET55 Prase_15_NODE_73_length_1487_cov_64.9, whole genome shotgun sequence 1,487
NZ_JAFBIX010000074.1 Faecalicatena contorta strain ET55 Prase_15_NODE_74_length_1383_cov_2.56051, whole genome shotgun sequence 1,383
NZ_JAFBIX010000075.1 Faecalicatena contorta strain ET55 Prase_15_NODE_75_length_1373_cov_11.553, whole genome shotgun sequence 1,373
NZ_JAFBIX010000076.1 Faecalicatena contorta strain ET55 Prase_15_NODE_76_length_1370_cov_4.06034, whole genome shotgun sequence 1,370
NZ_JAFBIX010000077.1 Faecalicatena contorta strain ET55 Prase_15_NODE_77_length_1363_cov_60.8584, whole genome shotgun sequence 1,363
NZ_JAFBIX010000078.1 Faecalicatena contorta strain ET55 Prase_15_NODE_78_length_1358_cov_9.3485, whole genome shotgun sequence 1,358
NZ_JAFBIX010000079.1 Faecalicatena contorta strain ET55 Prase_15_NODE_79_length_1160_cov_15.6854, whole genome shotgun sequence 1,160
NZ_JAFBIX010000080.1 Faecalicatena contorta strain ET55 Prase_15_NODE_80_length_1122_cov_15.4724, whole genome shotgun sequence 1,122
NZ_JAFBIX010000081.1 Faecalicatena contorta strain ET55 Prase_15_NODE_81_length_983_cov_47.2979, whole genome shotgun sequence 983
NZ_JAFBIX010000082.1 Faecalicatena contorta strain ET55 Prase_15_NODE_84_length_612_cov_31.0742, whole genome shotgun sequence 612
NZ_JAFBIX010000083.1 Faecalicatena contorta strain ET55 Prase_15_NODE_86_length_590_cov_53.879, whole genome shotgun sequence 590
NZ_JAFBIX010000084.1 Faecalicatena contorta strain ET55 Prase_15_NODE_89_length_543_cov_2.0625, whole genome shotgun sequence 543
NZ_JAFBIX010000085.1 Faecalicatena contorta strain ET55 Prase_15_NODE_90_length_524_cov_4.42065, whole genome shotgun sequence 461
NZ_JAFBIX010000086.1 Faecalicatena contorta strain ET55 Prase_15_NODE_103_length_443_cov_3.3481, whole genome shotgun sequence 443
NZ_JAFBIX010000087.1 Faecalicatena contorta strain ET55 Prase_15_NODE_108_length_413_cov_9.20629, whole genome shotgun sequence 413
NZ_JAFBIX010000088.1 Faecalicatena contorta strain ET55 Prase_15_NODE_109_length_386_cov_13.0541, whole genome shotgun sequence 386
NZ_JAFBIX010000089.1 Faecalicatena contorta strain ET55 Prase_15_NODE_110_length_345_cov_13.2202, whole genome shotgun sequence 345
NZ_JAFBIX010000090.1 Faecalicatena contorta strain ET55 Prase_15_NODE_111_length_324_cov_15.4619, whole genome shotgun sequence 324
NZ_JAFBIX010000091.1 Faecalicatena contorta strain ET55 Prase_15_NODE_112_length_269_cov_9.15493, whole genome shotgun sequence 269
NZ_JAFBIX010000092.1 Faecalicatena contorta strain ET55 Prase_15_NODE_113_length_254_cov_13.7795, whole genome shotgun sequence 254
NZ_JAFBIX010000093.1 Faecalicatena contorta strain ET55 Prase_15_NODE_114_length_253_cov_20.746, whole genome shotgun sequence 253

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory