fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAFBIY01 sp021531975 ET52

Genome identifier: GCF_021531975.1

NCBI assembly name: ASM2153197v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, JAFBIY01, JAFBIY01 sp021531975

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Faecalicatena, Faecalicatena contorta

Scaffolds: 34

Genes: 2,393 Protein-coding: 2,302 RNAs: 68 pseudogenes: 23

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAFBIY010000001.1 Faecalicatena contorta strain ET52 Prase_5_NODE_1_length_505690_cov_66.6345, whole genome shotgun sequence 505,690
NZ_JAFBIY010000002.1 Faecalicatena contorta strain ET52 Prase_5_NODE_2_length_342060_cov_68.241, whole genome shotgun sequence 342,060
NZ_JAFBIY010000003.1 Faecalicatena contorta strain ET52 Prase_5_NODE_3_length_324805_cov_61.4446, whole genome shotgun sequence 324,805
NZ_JAFBIY010000004.1 Faecalicatena contorta strain ET52 Prase_5_NODE_4_length_295655_cov_59.5648, whole genome shotgun sequence 295,655
NZ_JAFBIY010000005.1 Faecalicatena contorta strain ET52 Prase_5_NODE_5_length_232462_cov_71.9622, whole genome shotgun sequence 232,462
NZ_JAFBIY010000006.1 Faecalicatena contorta strain ET52 Prase_5_NODE_6_length_188454_cov_63.7746, whole genome shotgun sequence 188,454
NZ_JAFBIY010000007.1 Faecalicatena contorta strain ET52 Prase_5_NODE_7_length_110972_cov_66.9399, whole genome shotgun sequence 110,972
NZ_JAFBIY010000008.1 Faecalicatena contorta strain ET52 Prase_5_NODE_8_length_78370_cov_68.505, whole genome shotgun sequence 78,370
NZ_JAFBIY010000009.1 Faecalicatena contorta strain ET52 Prase_5_NODE_9_length_57912_cov_61.2006, whole genome shotgun sequence 57,912
NZ_JAFBIY010000010.1 Faecalicatena contorta strain ET52 Prase_5_NODE_10_length_53803_cov_67.9493, whole genome shotgun sequence 53,803
NZ_JAFBIY010000011.1 Faecalicatena contorta strain ET52 Prase_5_NODE_11_length_50286_cov_61.1094, whole genome shotgun sequence 50,286
NZ_JAFBIY010000012.1 Faecalicatena contorta strain ET52 Prase_5_NODE_12_length_47371_cov_67.4154, whole genome shotgun sequence 47,371
NZ_JAFBIY010000013.1 Faecalicatena contorta strain ET52 Prase_5_NODE_13_length_42902_cov_59.6293, whole genome shotgun sequence 42,902
NZ_JAFBIY010000014.1 Faecalicatena contorta strain ET52 Prase_5_NODE_14_length_25911_cov_67.9591, whole genome shotgun sequence 25,911
NZ_JAFBIY010000015.1 Faecalicatena contorta strain ET52 Prase_5_NODE_15_length_19701_cov_60.2801, whole genome shotgun sequence 19,701
NZ_JAFBIY010000016.1 Faecalicatena contorta strain ET52 Prase_5_NODE_16_length_15685_cov_61.7836, whole genome shotgun sequence 15,685
NZ_JAFBIY010000017.1 Faecalicatena contorta strain ET52 Prase_5_NODE_17_length_8754_cov_53.022, whole genome shotgun sequence 8,754
NZ_JAFBIY010000018.1 Faecalicatena contorta strain ET52 Prase_5_NODE_18_length_7845_cov_72.2204, whole genome shotgun sequence 7,845
NZ_JAFBIY010000019.1 Faecalicatena contorta strain ET52 Prase_5_NODE_19_length_7744_cov_61.703, whole genome shotgun sequence 7,744
NZ_JAFBIY010000020.1 Faecalicatena contorta strain ET52 Prase_5_NODE_20_length_7681_cov_64.4257, whole genome shotgun sequence 7,681
NZ_JAFBIY010000021.1 Faecalicatena contorta strain ET52 Prase_5_NODE_21_length_4881_cov_249.163, whole genome shotgun sequence 4,881
NZ_JAFBIY010000022.1 Faecalicatena contorta strain ET52 Prase_5_NODE_22_length_4635_cov_46.3296, whole genome shotgun sequence 4,635
NZ_JAFBIY010000023.1 Faecalicatena contorta strain ET52 Prase_5_NODE_26_length_861_cov_15.1839, whole genome shotgun sequence 790
NZ_JAFBIY010000024.1 Faecalicatena contorta strain ET52 Prase_5_NODE_36_length_634_cov_125.473, whole genome shotgun sequence 634
NZ_JAFBIY010000025.1 Faecalicatena contorta strain ET52 Prase_5_NODE_39_length_619_cov_4.30081, whole genome shotgun sequence 560
NZ_JAFBIY010000026.1 Faecalicatena contorta strain ET52 Prase_5_NODE_46_length_539_cov_4.35194, whole genome shotgun sequence 479
NZ_JAFBIY010000027.1 Faecalicatena contorta strain ET52 Prase_5_NODE_50_length_505_cov_44.127, whole genome shotgun sequence 505
NZ_JAFBIY010000028.1 Faecalicatena contorta strain ET52 Prase_5_NODE_56_length_488_cov_46.7867, whole genome shotgun sequence 488
NZ_JAFBIY010000029.1 Faecalicatena contorta strain ET52 Prase_5_NODE_59_length_483_cov_128.927, whole genome shotgun sequence 483
NZ_JAFBIY010000030.1 Faecalicatena contorta strain ET52 Prase_5_NODE_84_length_376_cov_91.9759, whole genome shotgun sequence 376
NZ_JAFBIY010000031.1 Faecalicatena contorta strain ET52 Prase_5_NODE_85_length_362_cov_62.4638, whole genome shotgun sequence 362
NZ_JAFBIY010000032.1 Faecalicatena contorta strain ET52 Prase_5_NODE_86_length_303_cov_80.25, whole genome shotgun sequence 303
NZ_JAFBIY010000033.1 Faecalicatena contorta strain ET52 Prase_5_NODE_87_length_257_cov_54.3692, whole genome shotgun sequence 257
NZ_JAFBIY010000034.1 Faecalicatena contorta strain ET52 Prase_5_NODE_88_length_244_cov_134.35, whole genome shotgun sequence 244

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory