fast.genomicscompare 6,575 genera of bacteria & archaea

 

PPXY01 sp021655115 Cult3

Genome identifier: GCF_021655115.1

NCBI assembly name: ASM2165511v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Tissierellales, Tepidimicrobiaceae, PPXY01, PPXY01 sp021655115

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Clostridiaceae, Clostridium

Scaffolds: 69

Genes: 2,447 Protein-coding: 2,375 RNAs: 46 pseudogenes: 26

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_PPXY01000001.1 Clostridium sp. Cult3 NODE_1, whole genome shotgun sequence 121,321
NZ_PPXY01000002.1 Clostridium sp. Cult3 NODE_2, whole genome shotgun sequence 26,411
NZ_PPXY01000003.1 Clostridium sp. Cult3 NODE_3, whole genome shotgun sequence 67,534
NZ_PPXY01000004.1 Clostridium sp. Cult3 NODE_4, whole genome shotgun sequence 39,081
NZ_PPXY01000005.1 Clostridium sp. Cult3 NODE_5, whole genome shotgun sequence 34,470
NZ_PPXY01000006.1 Clostridium sp. Cult3 NODE_6, whole genome shotgun sequence 24,277
NZ_PPXY01000007.1 Clostridium sp. Cult3 NODE_7, whole genome shotgun sequence 52,047
NZ_PPXY01000008.1 Clostridium sp. Cult3 NODE_8, whole genome shotgun sequence 74,398
NZ_PPXY01000009.1 Clostridium sp. Cult3 NODE_9, whole genome shotgun sequence 66,115
NZ_PPXY01000010.1 Clostridium sp. Cult3 NODE_10, whole genome shotgun sequence 14,310
NZ_PPXY01000011.1 Clostridium sp. Cult3 NODE_11, whole genome shotgun sequence 41,284
NZ_PPXY01000012.1 Clostridium sp. Cult3 NODE_12, whole genome shotgun sequence 39,103
NZ_PPXY01000013.1 Clostridium sp. Cult3 NODE_13, whole genome shotgun sequence 119,898
NZ_PPXY01000014.1 Clostridium sp. Cult3 NODE_14, whole genome shotgun sequence 38,014
NZ_PPXY01000015.1 Clostridium sp. Cult3 NODE_15, whole genome shotgun sequence 12,674
NZ_PPXY01000016.1 Clostridium sp. Cult3 NODE_16, whole genome shotgun sequence 11,070
NZ_PPXY01000017.1 Clostridium sp. Cult3 NODE_17, whole genome shotgun sequence 8,680
NZ_PPXY01000018.1 Clostridium sp. Cult3 NODE_18, whole genome shotgun sequence 52,023
NZ_PPXY01000019.1 Clostridium sp. Cult3 NODE_19, whole genome shotgun sequence 193,582
NZ_PPXY01000020.1 Clostridium sp. Cult3 NODE_20, whole genome shotgun sequence 26,850
NZ_PPXY01000021.1 Clostridium sp. Cult3 NODE_21, whole genome shotgun sequence 7,982
NZ_PPXY01000022.1 Clostridium sp. Cult3 NODE_22, whole genome shotgun sequence 81,839
NZ_PPXY01000023.1 Clostridium sp. Cult3 NODE_23, whole genome shotgun sequence 69,144
NZ_PPXY01000024.1 Clostridium sp. Cult3 NODE_24, whole genome shotgun sequence 55,301
NZ_PPXY01000025.1 Clostridium sp. Cult3 NODE_25, whole genome shotgun sequence 33,764
NZ_PPXY01000026.1 Clostridium sp. Cult3 NODE_26, whole genome shotgun sequence 13,754
NZ_PPXY01000027.1 Clostridium sp. Cult3 NODE_27, whole genome shotgun sequence 23,400
NZ_PPXY01000028.1 Clostridium sp. Cult3 NODE_28, whole genome shotgun sequence 7,603
NZ_PPXY01000029.1 Clostridium sp. Cult3 NODE_29, whole genome shotgun sequence 48,651
NZ_PPXY01000030.1 Clostridium sp. Cult3 NODE_30, whole genome shotgun sequence 24,189
NZ_PPXY01000031.1 Clostridium sp. Cult3 NODE_31, whole genome shotgun sequence 10,808
NZ_PPXY01000032.1 Clostridium sp. Cult3 NODE_32, whole genome shotgun sequence 28,526
NZ_PPXY01000033.1 Clostridium sp. Cult3 NODE_33, whole genome shotgun sequence 2,880
NZ_PPXY01000034.1 Clostridium sp. Cult3 NODE_34, whole genome shotgun sequence 71,210
NZ_PPXY01000035.1 Clostridium sp. Cult3 NODE_35, whole genome shotgun sequence 20,882
NZ_PPXY01000036.1 Clostridium sp. Cult3 NODE_36, whole genome shotgun sequence 2,882
NZ_PPXY01000037.1 Clostridium sp. Cult3 NODE_37, whole genome shotgun sequence 3,043
NZ_PPXY01000038.1 Clostridium sp. Cult3 NODE_38, whole genome shotgun sequence 65,398
NZ_PPXY01000039.1 Clostridium sp. Cult3 NODE_39, whole genome shotgun sequence 27,526
NZ_PPXY01000040.1 Clostridium sp. Cult3 NODE_40, whole genome shotgun sequence 25,637
NZ_PPXY01000041.1 Clostridium sp. Cult3 NODE_41, whole genome shotgun sequence 36,310
NZ_PPXY01000042.1 Clostridium sp. Cult3 NODE_42, whole genome shotgun sequence 48,511
NZ_PPXY01000043.1 Clostridium sp. Cult3 NODE_43, whole genome shotgun sequence 44,725
NZ_PPXY01000044.1 Clostridium sp. Cult3 NODE_44, whole genome shotgun sequence 41,618
NZ_PPXY01000045.1 Clostridium sp. Cult3 NODE_45, whole genome shotgun sequence 11,539
NZ_PPXY01000046.1 Clostridium sp. Cult3 NODE_46, whole genome shotgun sequence 15,880
NZ_PPXY01000047.1 Clostridium sp. Cult3 NODE_47, whole genome shotgun sequence 72,776
NZ_PPXY01000048.1 Clostridium sp. Cult3 NODE_48, whole genome shotgun sequence 10,004
NZ_PPXY01000049.1 Clostridium sp. Cult3 NODE_49, whole genome shotgun sequence 47,365
NZ_PPXY01000050.1 Clostridium sp. Cult3 NODE_50, whole genome shotgun sequence 559
NZ_PPXY01000051.1 Clostridium sp. Cult3 NODE_51, whole genome shotgun sequence 40,833
NZ_PPXY01000052.1 Clostridium sp. Cult3 NODE_52, whole genome shotgun sequence 20,378
NZ_PPXY01000053.1 Clostridium sp. Cult3 NODE_53, whole genome shotgun sequence 6,947
NZ_PPXY01000054.1 Clostridium sp. Cult3 NODE_54, whole genome shotgun sequence 14,964
NZ_PPXY01000055.1 Clostridium sp. Cult3 NODE_55, whole genome shotgun sequence 44,948
NZ_PPXY01000056.1 Clostridium sp. Cult3 NODE_56, whole genome shotgun sequence 6,949
NZ_PPXY01000057.1 Clostridium sp. Cult3 NODE_57, whole genome shotgun sequence 39,022
NZ_PPXY01000058.1 Clostridium sp. Cult3 NODE_58, whole genome shotgun sequence 19,822
NZ_PPXY01000059.1 Clostridium sp. Cult3 NODE_59, whole genome shotgun sequence 31,587
NZ_PPXY01000060.1 Clostridium sp. Cult3 NODE_60, whole genome shotgun sequence 34,536
NZ_PPXY01000061.1 Clostridium sp. Cult3 NODE_61, whole genome shotgun sequence 26,152
NZ_PPXY01000062.1 Clostridium sp. Cult3 NODE_62, whole genome shotgun sequence 32,507
NZ_PPXY01000063.1 Clostridium sp. Cult3 NODE_63, whole genome shotgun sequence 28,421
NZ_PPXY01000064.1 Clostridium sp. Cult3 NODE_64, whole genome shotgun sequence 3,624
NZ_PPXY01000065.1 Clostridium sp. Cult3 NODE_65, whole genome shotgun sequence 19,985
NZ_PPXY01000066.1 Clostridium sp. Cult3 NODE_66, whole genome shotgun sequence 4,639
NZ_PPXY01000067.1 Clostridium sp. Cult3 NODE_67, whole genome shotgun sequence 33,248
NZ_PPXY01000068.1 Clostridium sp. Cult3 NODE_68, whole genome shotgun sequence 17,872
NZ_PPXY01000069.1 Clostridium sp. Cult3 NODE_69, whole genome shotgun sequence 28,905

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory