fast.genomicscompare 6,575 genera of bacteria & archaea

 

Phocaeicola faecalis FXJYN30E22

Genome identifier: GCF_021730445.1

NCBI assembly name: ASM2173044v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Bacteroidaceae, Phocaeicola, Phocaeicola faecalis

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Bacteroidaceae, Phocaeicola, Phocaeicola faecalis

Scaffolds: 65

Genes: 3,615 Protein-coding: 3,442 RNAs: 81 pseudogenes: 92

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JADNRM010000001.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold1, whole genome shotgun sequence 983,340
NZ_JADNRM010000002.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold2, whole genome shotgun sequence 276,427
NZ_JADNRM010000003.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold3, whole genome shotgun sequence 256,065
NZ_JADNRM010000004.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold4, whole genome shotgun sequence 223,099
NZ_JADNRM010000005.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold5, whole genome shotgun sequence 194,160
NZ_JADNRM010000006.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold6, whole genome shotgun sequence 183,271
NZ_JADNRM010000007.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold7, whole genome shotgun sequence 174,088
NZ_JADNRM010000008.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold8, whole genome shotgun sequence 171,877
NZ_JADNRM010000009.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold9, whole genome shotgun sequence 158,344
NZ_JADNRM010000010.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold10, whole genome shotgun sequence 136,958
NZ_JADNRM010000011.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold11, whole genome shotgun sequence 129,577
NZ_JADNRM010000012.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold12, whole genome shotgun sequence 117,244
NZ_JADNRM010000013.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold13, whole genome shotgun sequence 115,126
NZ_JADNRM010000014.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold14, whole genome shotgun sequence 111,578
NZ_JADNRM010000015.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold15, whole genome shotgun sequence 111,337
NZ_JADNRM010000016.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold16, whole genome shotgun sequence 104,522
NZ_JADNRM010000017.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold17, whole genome shotgun sequence 102,100
NZ_JADNRM010000018.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold18, whole genome shotgun sequence 99,597
NZ_JADNRM010000019.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold19, whole genome shotgun sequence 70,846
NZ_JADNRM010000020.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold20, whole genome shotgun sequence 70,006
NZ_JADNRM010000021.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold21, whole genome shotgun sequence 65,065
NZ_JADNRM010000022.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold22, whole genome shotgun sequence 63,716
NZ_JADNRM010000023.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold23, whole genome shotgun sequence 51,467
NZ_JADNRM010000024.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold24, whole genome shotgun sequence 44,485
NZ_JADNRM010000025.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold25, whole genome shotgun sequence 44,424
NZ_JADNRM010000026.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold26, whole genome shotgun sequence 38,255
NZ_JADNRM010000027.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold27, whole genome shotgun sequence 36,233
NZ_JADNRM010000028.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold28, whole genome shotgun sequence 33,274
NZ_JADNRM010000029.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold29, whole genome shotgun sequence 27,418
NZ_JADNRM010000030.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold30, whole genome shotgun sequence 24,209
NZ_JADNRM010000031.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold31, whole genome shotgun sequence 12,810
NZ_JADNRM010000032.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold32, whole genome shotgun sequence 9,719
NZ_JADNRM010000033.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold33, whole genome shotgun sequence 9,274
NZ_JADNRM010000034.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold34, whole genome shotgun sequence 7,078
NZ_JADNRM010000035.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold35, whole genome shotgun sequence 6,405
NZ_JADNRM010000036.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold36, whole genome shotgun sequence 5,491
NZ_JADNRM010000037.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold37, whole genome shotgun sequence 5,301
NZ_JADNRM010000038.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold38, whole genome shotgun sequence 5,252
NZ_JADNRM010000039.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold39, whole genome shotgun sequence 4,864
NZ_JADNRM010000040.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold40, whole genome shotgun sequence 4,435
NZ_JADNRM010000041.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold41, whole genome shotgun sequence 4,359
NZ_JADNRM010000042.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold42, whole genome shotgun sequence 4,020
NZ_JADNRM010000043.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold43, whole genome shotgun sequence 3,027
NZ_JADNRM010000044.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold44, whole genome shotgun sequence 2,109
NZ_JADNRM010000045.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold45, whole genome shotgun sequence 1,998
NZ_JADNRM010000046.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold46, whole genome shotgun sequence 1,972
NZ_JADNRM010000047.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold47, whole genome shotgun sequence 1,324
NZ_JADNRM010000048.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold48, whole genome shotgun sequence 1,105
NZ_JADNRM010000049.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold49, whole genome shotgun sequence 902
NZ_JADNRM010000050.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold50, whole genome shotgun sequence 876
NZ_JADNRM010000051.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold51, whole genome shotgun sequence 793
NZ_JADNRM010000052.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold52, whole genome shotgun sequence 690
NZ_JADNRM010000053.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold53, whole genome shotgun sequence 647
NZ_JADNRM010000054.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold54, whole genome shotgun sequence 626
NZ_JADNRM010000055.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold55, whole genome shotgun sequence 594
NZ_JADNRM010000056.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold56, whole genome shotgun sequence 545
NZ_JADNRM010000057.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold57, whole genome shotgun sequence 539
NZ_JADNRM010000058.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold58, whole genome shotgun sequence 516
NZ_JADNRM010000059.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold59, whole genome shotgun sequence 512
NZ_JADNRM010000060.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold60, whole genome shotgun sequence 499
NZ_JADNRM010000061.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold61, whole genome shotgun sequence 371
NZ_JADNRM010000062.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold62, whole genome shotgun sequence 365
NZ_JADNRM010000063.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold63, whole genome shotgun sequence 354
NZ_JADNRM010000064.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold64, whole genome shotgun sequence 334
NZ_JADNRM010000065.1 Phocaeicola faecalis strain FXJYN30E22 Scaffold65, whole genome shotgun sequence 334

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory