fast.genomicscompare 6,575 genera of bacteria & archaea

 

Tenacibaculum_A aquimarinum K20-16

Genome identifier: GCF_022478115.1

NCBI assembly name: ASM2247811v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Tenacibaculum_A, Tenacibaculum_A aquimarinum

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Tenacibaculum, Tenacibaculum aquimarinum

Scaffolds: 13

Genes: 2,628 Protein-coding: 2,582 RNAs: 42 pseudogenes: 4

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAKGSC010000001.1 Tenacibaculum aquimarinum strain K20-16 NODE_1_length_1288669_cov_604.302238, whole genome shotgun sequence 1,288,669
NZ_JAKGSC010000002.1 Tenacibaculum aquimarinum strain K20-16 NODE_2_length_497787_cov_527.500826, whole genome shotgun sequence 497,787
NZ_JAKGSC010000003.1 Tenacibaculum aquimarinum strain K20-16 NODE_3_length_329075_cov_571.556854, whole genome shotgun sequence 329,075
NZ_JAKGSC010000004.1 Tenacibaculum aquimarinum strain K20-16 NODE_4_length_155160_cov_545.006964, whole genome shotgun sequence 155,160
NZ_JAKGSC010000005.1 Tenacibaculum aquimarinum strain K20-16 NODE_5_length_119280_cov_517.002684, whole genome shotgun sequence 119,280
NZ_JAKGSC010000006.1 Tenacibaculum aquimarinum strain K20-16 NODE_6_length_118829_cov_539.789721, whole genome shotgun sequence 118,829
NZ_JAKGSC010000007.1 Tenacibaculum aquimarinum strain K20-16 NODE_7_length_109535_cov_516.962579, whole genome shotgun sequence 109,535
NZ_JAKGSC010000008.1 Tenacibaculum aquimarinum strain K20-16 NODE_8_length_75230_cov_466.706106, whole genome shotgun sequence 75,230
NZ_JAKGSC010000009.1 Tenacibaculum aquimarinum strain K20-16 NODE_9_length_68993_cov_494.318054, whole genome shotgun sequence 68,993
NZ_JAKGSC010000010.1 Tenacibaculum aquimarinum strain K20-16 NODE_10_length_61034_cov_538.613662, whole genome shotgun sequence 61,034
NZ_JAKGSC010000011.1 Tenacibaculum aquimarinum strain K20-16 NODE_11_length_5418_cov_1142.299757, whole genome shotgun sequence 5,418
NZ_JAKGSC010000012.1 Tenacibaculum aquimarinum strain K20-16 NODE_12_length_3617_cov_901.998870, whole genome shotgun sequence 3,617
NZ_JAKGSC010000013.1 Tenacibaculum aquimarinum strain K20-16 NODE_13_length_2090_cov_850.614009, whole genome shotgun sequence 2,090

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory