fast.genomicscompare 6,575 genera of bacteria & archaea

 

Aestuariivivens insulae AH-MY3

Genome identifier: GCF_022662195.1

NCBI assembly name: ASM2266219v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, Aestuariivivens, Aestuariivivens insulae

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Aestuariivivens, Aestuariivivens insulae

Scaffolds: 33

Genes: 3,525 Protein-coding: 3,456 RNAs: 47 pseudogenes: 22

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAKMCS010000001.1 Aestuariivivens insulae strain AH-MY3 NODE_1_length_628889_cov_48.463412, whole genome shotgun sequence 628,889
NZ_JAKMCS010000002.1 Aestuariivivens insulae strain AH-MY3 NODE_2_length_402904_cov_48.226942, whole genome shotgun sequence 402,904
NZ_JAKMCS010000003.1 Aestuariivivens insulae strain AH-MY3 NODE_3_length_399754_cov_49.800797, whole genome shotgun sequence 399,754
NZ_JAKMCS010000004.1 Aestuariivivens insulae strain AH-MY3 NODE_4_length_342133_cov_50.659848, whole genome shotgun sequence 342,133
NZ_JAKMCS010000005.1 Aestuariivivens insulae strain AH-MY3 NODE_5_length_321320_cov_47.989271, whole genome shotgun sequence 321,320
NZ_JAKMCS010000006.1 Aestuariivivens insulae strain AH-MY3 NODE_6_length_272470_cov_50.144942, whole genome shotgun sequence 272,470
NZ_JAKMCS010000007.1 Aestuariivivens insulae strain AH-MY3 NODE_7_length_251449_cov_49.005296, whole genome shotgun sequence 251,449
NZ_JAKMCS010000008.1 Aestuariivivens insulae strain AH-MY3 NODE_8_length_211175_cov_49.167308, whole genome shotgun sequence 211,175
NZ_JAKMCS010000009.1 Aestuariivivens insulae strain AH-MY3 NODE_9_length_191173_cov_49.292312, whole genome shotgun sequence 191,173
NZ_JAKMCS010000010.1 Aestuariivivens insulae strain AH-MY3 NODE_10_length_118827_cov_47.896773, whole genome shotgun sequence 118,827
NZ_JAKMCS010000011.1 Aestuariivivens insulae strain AH-MY3 NODE_11_length_112338_cov_48.160742, whole genome shotgun sequence 112,338
NZ_JAKMCS010000012.1 Aestuariivivens insulae strain AH-MY3 NODE_12_length_103180_cov_47.411022, whole genome shotgun sequence 103,180
NZ_JAKMCS010000013.1 Aestuariivivens insulae strain AH-MY3 NODE_13_length_101422_cov_49.795182, whole genome shotgun sequence 101,422
NZ_JAKMCS010000014.1 Aestuariivivens insulae strain AH-MY3 NODE_14_length_100751_cov_48.465833, whole genome shotgun sequence 100,751
NZ_JAKMCS010000015.1 Aestuariivivens insulae strain AH-MY3 NODE_15_length_94387_cov_48.548080, whole genome shotgun sequence 94,387
NZ_JAKMCS010000016.1 Aestuariivivens insulae strain AH-MY3 NODE_16_length_76744_cov_47.939570, whole genome shotgun sequence 76,744
NZ_JAKMCS010000017.1 Aestuariivivens insulae strain AH-MY3 NODE_17_length_71227_cov_47.463193, whole genome shotgun sequence 71,227
NZ_JAKMCS010000018.1 Aestuariivivens insulae strain AH-MY3 NODE_18_length_67025_cov_48.100302, whole genome shotgun sequence 67,025
NZ_JAKMCS010000019.1 Aestuariivivens insulae strain AH-MY3 NODE_19_length_56826_cov_47.761407, whole genome shotgun sequence 56,826
NZ_JAKMCS010000020.1 Aestuariivivens insulae strain AH-MY3 NODE_20_length_56184_cov_47.585440, whole genome shotgun sequence 56,184
NZ_JAKMCS010000021.1 Aestuariivivens insulae strain AH-MY3 NODE_21_length_54785_cov_47.380823, whole genome shotgun sequence 54,785
NZ_JAKMCS010000022.1 Aestuariivivens insulae strain AH-MY3 NODE_22_length_51475_cov_47.747215, whole genome shotgun sequence 51,475
NZ_JAKMCS010000023.1 Aestuariivivens insulae strain AH-MY3 NODE_23_length_50739_cov_47.150577, whole genome shotgun sequence 50,739
NZ_JAKMCS010000024.1 Aestuariivivens insulae strain AH-MY3 NODE_24_length_43511_cov_49.212060, whole genome shotgun sequence 43,511
NZ_JAKMCS010000025.1 Aestuariivivens insulae strain AH-MY3 NODE_25_length_20803_cov_51.663668, whole genome shotgun sequence 20,803
NZ_JAKMCS010000026.1 Aestuariivivens insulae strain AH-MY3 NODE_26_length_9170_cov_49.199823, whole genome shotgun sequence 9,170
NZ_JAKMCS010000027.1 Aestuariivivens insulae strain AH-MY3 NODE_27_length_9137_cov_50.155605, whole genome shotgun sequence 9,137
NZ_JAKMCS010000028.1 Aestuariivivens insulae strain AH-MY3 NODE_28_length_3369_cov_100.314621, whole genome shotgun sequence 3,369
NZ_JAKMCS010000029.1 Aestuariivivens insulae strain AH-MY3 NODE_29_length_2482_cov_94.821656, whole genome shotgun sequence 2,482
NZ_JAKMCS010000030.1 Aestuariivivens insulae strain AH-MY3 NODE_31_length_1337_cov_90.873554, whole genome shotgun sequence 1,337
NZ_JAKMCS010000031.1 Aestuariivivens insulae strain AH-MY3 NODE_32_length_1287_cov_303.606897, whole genome shotgun sequence 1,287
NZ_JAKMCS010000032.1 Aestuariivivens insulae strain AH-MY3 NODE_33_length_1280_cov_188.285343, whole genome shotgun sequence 1,280
NZ_JAKMCS010000033.1 Aestuariivivens insulae strain AH-MY3 NODE_34_length_1229_cov_94.114338, whole genome shotgun sequence 1,229

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory