fast.genomicscompare 6,575 genera of bacteria & archaea

 

Aliiroseovarius_A subalbicans N1Y82

Genome identifier: GCF_022678625.1

NCBI assembly name: ASM2267862v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Aliiroseovarius_A, Aliiroseovarius_A subalbicans

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Aliiroseovarius, Aliiroseovarius subalbicans

Scaffolds: 15

Genes: 3,511 Protein-coding: 3,433 RNAs: 49 pseudogenes: 29

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JALBYQ010000001.1 Aliiroseovarius subalbicans strain N1Y82 NODE_1_length_1544438_cov_503.058916, whole genome shotgun sequence 1,544,438
NZ_JALBYQ010000002.1 Aliiroseovarius subalbicans strain N1Y82 NODE_2_length_537292_cov_585.209594, whole genome shotgun sequence 537,292
NZ_JALBYQ010000003.1 Aliiroseovarius subalbicans strain N1Y82 NODE_3_length_468742_cov_638.793255, whole genome shotgun sequence 468,742
NZ_JALBYQ010000004.1 Aliiroseovarius subalbicans strain N1Y82 NODE_4_length_437680_cov_571.175723, whole genome shotgun sequence 437,680
NZ_JALBYQ010000005.1 Aliiroseovarius subalbicans strain N1Y82 NODE_5_length_200188_cov_546.067513, whole genome shotgun sequence 200,188
NZ_JALBYQ010000006.1 Aliiroseovarius subalbicans strain N1Y82 NODE_6_length_118658_cov_380.796890, whole genome shotgun sequence 118,658
NZ_JALBYQ010000007.1 Aliiroseovarius subalbicans strain N1Y82 NODE_7_length_84995_cov_709.650098, whole genome shotgun sequence 84,995
NZ_JALBYQ010000008.1 Aliiroseovarius subalbicans strain N1Y82 NODE_8_length_61881_cov_621.079898, whole genome shotgun sequence 61,881
NZ_JALBYQ010000009.1 Aliiroseovarius subalbicans strain N1Y82 NODE_9_length_60834_cov_737.520928, whole genome shotgun sequence 60,834
NZ_JALBYQ010000010.1 Aliiroseovarius subalbicans strain N1Y82 NODE_10_length_5914_cov_1235.343156, whole genome shotgun sequence 5,914
NZ_JALBYQ010000011.1 Aliiroseovarius subalbicans strain N1Y82 NODE_11_length_4161_cov_545.929726, whole genome shotgun sequence 4,161
NZ_JALBYQ010000012.1 Aliiroseovarius subalbicans strain N1Y82 NODE_12_length_3904_cov_628.126601, whole genome shotgun sequence 3,904
NZ_JALBYQ010000013.1 Aliiroseovarius subalbicans strain N1Y82 NODE_13_length_1902_cov_1132.584110, whole genome shotgun sequence 1,902
NZ_JALBYQ010000014.1 Aliiroseovarius subalbicans strain N1Y82 NODE_14_length_599_cov_1053.852490, whole genome shotgun sequence 599
NZ_JALBYQ010000015.1 Aliiroseovarius subalbicans strain N1Y82 NODE_15_length_473_cov_1821.494949, whole genome shotgun sequence 473

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory