fast.genomicscompare 6,575 genera of bacteria & archaea

 

CFH-32150 sp022758295 CFH 32150

Genome identifier: GCF_022758295.1

NCBI assembly name: ASM2275829v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, CFH-32150, CFH-32150 sp022758295

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, Lysobacter

Scaffolds: 17

Genes: 3,276 Protein-coding: 3,127 RNAs: 54 pseudogenes: 95

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JALDWJ010000001.1 Lysobacter sp. CFH 32150 Scaffold1_1, whole genome shotgun sequence 777,244
NZ_JALDWJ010000002.1 Lysobacter sp. CFH 32150 Scaffold2_1, whole genome shotgun sequence 580,865
NZ_JALDWJ010000003.1 Lysobacter sp. CFH 32150 Scaffold3_1, whole genome shotgun sequence 420,792
NZ_JALDWJ010000004.1 Lysobacter sp. CFH 32150 Scaffold4_1, whole genome shotgun sequence 334,901
NZ_JALDWJ010000005.1 Lysobacter sp. CFH 32150 Scaffold4_2, whole genome shotgun sequence 26,910
NZ_JALDWJ010000006.1 Lysobacter sp. CFH 32150 Scaffold4_3, whole genome shotgun sequence 38,641
NZ_JALDWJ010000007.1 Lysobacter sp. CFH 32150 Scaffold5_1, whole genome shotgun sequence 330,970
NZ_JALDWJ010000008.1 Lysobacter sp. CFH 32150 Scaffold6_1, whole genome shotgun sequence 278,697
NZ_JALDWJ010000009.1 Lysobacter sp. CFH 32150 Scaffold7_1, whole genome shotgun sequence 244,208
NZ_JALDWJ010000010.1 Lysobacter sp. CFH 32150 Scaffold8_1, whole genome shotgun sequence 199,768
NZ_JALDWJ010000011.1 Lysobacter sp. CFH 32150 Scaffold9_1, whole genome shotgun sequence 143,658
NZ_JALDWJ010000012.1 Lysobacter sp. CFH 32150 Scaffold10_1, whole genome shotgun sequence 49,471
NZ_JALDWJ010000013.1 Lysobacter sp. CFH 32150 Scaffold11_1, whole genome shotgun sequence 48,727
NZ_JALDWJ010000014.1 Lysobacter sp. CFH 32150 Scaffold12_1, whole genome shotgun sequence 22,066
NZ_JALDWJ010000015.1 Lysobacter sp. CFH 32150 Scaffold13_1, whole genome shotgun sequence 5,614
NZ_JALDWJ010000016.1 Lysobacter sp. CFH 32150 Scaffold14_1, whole genome shotgun sequence 5,607
NZ_JALDWJ010000017.1 Lysobacter sp. CFH 32150 Scaffold15_1, whole genome shotgun sequence 1,503

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory