fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA7332 sp022808675 FAFU027

Genome identifier: GCF_022808675.1

NCBI assembly name: ASM2280867v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, UBA7332, UBA7332, UBA7332 sp022808675

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Tannerellaceae, Parabacteroides

Scaffolds: 35

Genes: 3,768 Protein-coding: 3,636 RNAs: 91 pseudogenes: 41

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAKZKV010000001.1 Parabacteroides sp. FAFU027 Scaffold1, whole genome shotgun sequence 813,253
NZ_JAKZKV010000002.1 Parabacteroides sp. FAFU027 Scaffold2, whole genome shotgun sequence 538,124
NZ_JAKZKV010000003.1 Parabacteroides sp. FAFU027 Scaffold3, whole genome shotgun sequence 522,306
NZ_JAKZKV010000004.1 Parabacteroides sp. FAFU027 Scaffold4, whole genome shotgun sequence 393,883
NZ_JAKZKV010000005.1 Parabacteroides sp. FAFU027 Scaffold5, whole genome shotgun sequence 385,512
NZ_JAKZKV010000006.1 Parabacteroides sp. FAFU027 Scaffold6, whole genome shotgun sequence 350,933
NZ_JAKZKV010000007.1 Parabacteroides sp. FAFU027 Scaffold7, whole genome shotgun sequence 336,585
NZ_JAKZKV010000008.1 Parabacteroides sp. FAFU027 Scaffold8, whole genome shotgun sequence 260,562
NZ_JAKZKV010000009.1 Parabacteroides sp. FAFU027 Scaffold9, whole genome shotgun sequence 161,889
NZ_JAKZKV010000010.1 Parabacteroides sp. FAFU027 Scaffold10, whole genome shotgun sequence 154,904
NZ_JAKZKV010000011.1 Parabacteroides sp. FAFU027 Scaffold11, whole genome shotgun sequence 140,248
NZ_JAKZKV010000012.1 Parabacteroides sp. FAFU027 Scaffold12, whole genome shotgun sequence 129,788
NZ_JAKZKV010000013.1 Parabacteroides sp. FAFU027 Scaffold13, whole genome shotgun sequence 126,417
NZ_JAKZKV010000014.1 Parabacteroides sp. FAFU027 Scaffold14, whole genome shotgun sequence 107,672
NZ_JAKZKV010000015.1 Parabacteroides sp. FAFU027 Scaffold15, whole genome shotgun sequence 98,202
NZ_JAKZKV010000016.1 Parabacteroides sp. FAFU027 Scaffold16, whole genome shotgun sequence 90,807
NZ_JAKZKV010000017.1 Parabacteroides sp. FAFU027 Scaffold17, whole genome shotgun sequence 55,171
NZ_JAKZKV010000018.1 Parabacteroides sp. FAFU027 Scaffold18, whole genome shotgun sequence 47,652
NZ_JAKZKV010000019.1 Parabacteroides sp. FAFU027 Scaffold19, whole genome shotgun sequence 29,363
NZ_JAKZKV010000020.1 Parabacteroides sp. FAFU027 Scaffold20, whole genome shotgun sequence 29,299
NZ_JAKZKV010000021.1 Parabacteroides sp. FAFU027 Scaffold21, whole genome shotgun sequence 26,157
NZ_JAKZKV010000022.1 Parabacteroides sp. FAFU027 Scaffold22, whole genome shotgun sequence 25,716
NZ_JAKZKV010000023.1 Parabacteroides sp. FAFU027 Scaffold23, whole genome shotgun sequence 20,160
NZ_JAKZKV010000024.1 Parabacteroides sp. FAFU027 Scaffold24, whole genome shotgun sequence 19,702
NZ_JAKZKV010000025.1 Parabacteroides sp. FAFU027 Scaffold25, whole genome shotgun sequence 12,726
NZ_JAKZKV010000026.1 Parabacteroides sp. FAFU027 Scaffold26, whole genome shotgun sequence 6,593
NZ_JAKZKV010000027.1 Parabacteroides sp. FAFU027 Scaffold27, whole genome shotgun sequence 6,228
NZ_JAKZKV010000028.1 Parabacteroides sp. FAFU027 Scaffold28, whole genome shotgun sequence 5,069
NZ_JAKZKV010000029.1 Parabacteroides sp. FAFU027 Scaffold29, whole genome shotgun sequence 5,025
NZ_JAKZKV010000030.1 Parabacteroides sp. FAFU027 Scaffold30, whole genome shotgun sequence 2,573
NZ_JAKZKV010000031.1 Parabacteroides sp. FAFU027 Scaffold31, whole genome shotgun sequence 2,109
NZ_JAKZKV010000032.1 Parabacteroides sp. FAFU027 Scaffold32, whole genome shotgun sequence 1,966
NZ_JAKZKV010000033.1 Parabacteroides sp. FAFU027 Scaffold33, whole genome shotgun sequence 1,926
NZ_JAKZKV010000034.1 Parabacteroides sp. FAFU027 Scaffold34, whole genome shotgun sequence 1,776
NZ_JAKZKV010000035.1 Parabacteroides sp. FAFU027 Scaffold35, whole genome shotgun sequence 1,774

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory