fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pseudolachnospira sp022867805 NSJ-177

Genome identifier: GCF_022867805.1

NCBI assembly name: ASM2286780v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Pseudolachnospira, Pseudolachnospira sp022867805

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Lachnospiraceae, Cuneatibacter

Scaffolds: 16

Genes: 3,929 Protein-coding: 3,832 RNAs: 58 pseudogenes: 39

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JALIFO010000001.1 Cuneatibacter sp. NSJ-177 B-1669N-35_ctg00002, whole genome shotgun sequence 874,991
NZ_JALIFO010000002.1 Cuneatibacter sp. NSJ-177 B-1669N-35_ctg00003, whole genome shotgun sequence 648,092
NZ_JALIFO010000003.1 Cuneatibacter sp. NSJ-177 B-1669N-35_ctg00020, whole genome shotgun sequence 58,932
NZ_JALIFO010000004.1 Cuneatibacter sp. NSJ-177 B-1669N-35_ctg00010, whole genome shotgun sequence 109,548
NZ_JALIFO010000005.1 Cuneatibacter sp. NSJ-177 B-1669N-35_ctg00044, whole genome shotgun sequence 30,901
NZ_JALIFO010000006.1 Cuneatibacter sp. NSJ-177 B-1669N-35_ctg00001, whole genome shotgun sequence 1,275,449
NZ_JALIFO010000007.1 Cuneatibacter sp. NSJ-177 B-1669N-35_ctg00009, whole genome shotgun sequence 125,507
NZ_JALIFO010000008.1 Cuneatibacter sp. NSJ-177 B-1669N-35_ctg00032, whole genome shotgun sequence 39,801
NZ_JALIFO010000009.1 Cuneatibacter sp. NSJ-177 B-1669N-35_ctg00018, whole genome shotgun sequence 65,713
NZ_JALIFO010000010.1 Cuneatibacter sp. NSJ-177 B-1669N-35_ctg00007, whole genome shotgun sequence 154,030
NZ_JALIFO010000011.1 Cuneatibacter sp. NSJ-177 B-1669N-35_ctg00011, whole genome shotgun sequence 107,660
NZ_JALIFO010000012.1 Cuneatibacter sp. NSJ-177 B-1669N-35_ctg00029, whole genome shotgun sequence 44,695
NZ_JALIFO010000013.1 Cuneatibacter sp. NSJ-177 B-1669N-35_ctg00006, whole genome shotgun sequence 154,907
NZ_JALIFO010000014.1 Cuneatibacter sp. NSJ-177 B-1669N-35_ctg00005, whole genome shotgun sequence 218,005
NZ_JALIFO010000015.1 Cuneatibacter sp. NSJ-177 B-1669N-35_ctg00004, whole genome shotgun sequence 237,123
NZ_JALIFO010000016.1 Cuneatibacter sp. NSJ-177 B-1669N-35_ctg00008, whole genome shotgun sequence 139,400

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory