fast.genomicscompare 6,575 genera of bacteria & archaea

 

Marinovum sp022867865 J2-8

Genome identifier: GCF_022867865.1

NCBI assembly name: ASM2286786v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Marinovum, Marinovum sp022867865

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Phaeobacter

Scaffolds: 17

Genes: 4,688 Protein-coding: 4,185 RNAs: 60 pseudogenes: 443

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JALIEC010000001.1 Phaeobacter sp. J2-8 1, whole genome shotgun sequence 1,163,006
NZ_JALIEC010000002.1 Phaeobacter sp. J2-8 2, whole genome shotgun sequence 728,766
NZ_JALIEC010000003.1 Phaeobacter sp. J2-8 3, whole genome shotgun sequence 700,284
NZ_JALIEC010000004.1 Phaeobacter sp. J2-8 4, whole genome shotgun sequence 468,337
NZ_JALIEC010000005.1 Phaeobacter sp. J2-8 5, whole genome shotgun sequence 355,073
NZ_JALIEC010000006.1 Phaeobacter sp. J2-8 6, whole genome shotgun sequence 318,165
NZ_JALIEC010000007.1 Phaeobacter sp. J2-8 7, whole genome shotgun sequence 191,094
NZ_JALIEC010000008.1 Phaeobacter sp. J2-8 8, whole genome shotgun sequence 144,373
NZ_JALIEC010000009.1 Phaeobacter sp. J2-8 9, whole genome shotgun sequence 138,807
NZ_JALIEC010000010.1 Phaeobacter sp. J2-8 10, whole genome shotgun sequence 138,341
NZ_JALIEC010000011.1 Phaeobacter sp. J2-8 11, whole genome shotgun sequence 106,394
NZ_JALIEC010000012.1 Phaeobacter sp. J2-8 12, whole genome shotgun sequence 84,081
NZ_JALIEC010000013.1 Phaeobacter sp. J2-8 13, whole genome shotgun sequence 78,189
NZ_JALIEC010000014.1 Phaeobacter sp. J2-8 14, whole genome shotgun sequence 64,501
NZ_JALIEC010000015.1 Phaeobacter sp. J2-8 15, whole genome shotgun sequence 51,660
NZ_JALIEC010000016.1 Phaeobacter sp. J2-8 16, whole genome shotgun sequence 39,769
NZ_JALIEC010000017.1 Phaeobacter sp. J2-8 17, whole genome shotgun sequence 27,692

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory