fast.genomicscompare 6,575 genera of bacteria & archaea

 

Isoalcanivorax quisquiliarum CY1518

Genome identifier: GCF_023051175.1

NCBI assembly name: ASM2305117v1

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Alcanivoracaceae, Isoalcanivorax, Isoalcanivorax quisquiliarum

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Oceanospirillales, Alcanivoracaceae, Alcanivorax, Alcanivorax quisquiliarum

Scaffolds: 44

Genes: 2,910 Protein-coding: 2,784 RNAs: 48 pseudogenes: 78

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JALKII010000001.1 Alcanivorax quisquiliarum strain CY1518 NODE_1_length_682500_cov_236.037228, whole genome shotgun sequence 682,500
NZ_JALKII010000002.1 Alcanivorax quisquiliarum strain CY1518 NODE_2_length_637345_cov_242.926492, whole genome shotgun sequence 637,345
NZ_JALKII010000003.1 Alcanivorax quisquiliarum strain CY1518 NODE_3_length_321925_cov_234.775388, whole genome shotgun sequence 321,925
NZ_JALKII010000004.1 Alcanivorax quisquiliarum strain CY1518 NODE_4_length_256152_cov_231.006604, whole genome shotgun sequence 256,152
NZ_JALKII010000005.1 Alcanivorax quisquiliarum strain CY1518 NODE_5_length_251765_cov_229.482276, whole genome shotgun sequence 251,765
NZ_JALKII010000006.1 Alcanivorax quisquiliarum strain CY1518 NODE_6_length_229685_cov_236.526506, whole genome shotgun sequence 229,685
NZ_JALKII010000007.1 Alcanivorax quisquiliarum strain CY1518 NODE_7_length_213296_cov_229.992036, whole genome shotgun sequence 213,296
NZ_JALKII010000008.1 Alcanivorax quisquiliarum strain CY1518 NODE_8_length_122654_cov_235.859949, whole genome shotgun sequence 122,654
NZ_JALKII010000009.1 Alcanivorax quisquiliarum strain CY1518 NODE_9_length_121667_cov_222.196612, whole genome shotgun sequence 121,667
NZ_JALKII010000010.1 Alcanivorax quisquiliarum strain CY1518 NODE_10_length_93350_cov_229.697823, whole genome shotgun sequence 93,350
NZ_JALKII010000011.1 Alcanivorax quisquiliarum strain CY1518 NODE_11_length_56793_cov_224.728895, whole genome shotgun sequence 56,793
NZ_JALKII010000012.1 Alcanivorax quisquiliarum strain CY1518 NODE_12_length_49425_cov_231.360501, whole genome shotgun sequence 49,425
NZ_JALKII010000013.1 Alcanivorax quisquiliarum strain CY1518 NODE_13_length_37883_cov_232.570153, whole genome shotgun sequence 37,883
NZ_JALKII010000014.1 Alcanivorax quisquiliarum strain CY1518 NODE_14_length_32598_cov_238.648350, whole genome shotgun sequence 32,598
NZ_JALKII010000015.1 Alcanivorax quisquiliarum strain CY1518 NODE_15_length_30583_cov_235.401003, whole genome shotgun sequence 30,583
NZ_JALKII010000016.1 Alcanivorax quisquiliarum strain CY1518 NODE_16_length_16986_cov_215.569519, whole genome shotgun sequence 16,986
NZ_JALKII010000017.1 Alcanivorax quisquiliarum strain CY1518 NODE_17_length_16930_cov_227.554501, whole genome shotgun sequence 16,930
NZ_JALKII010000018.1 Alcanivorax quisquiliarum strain CY1518 NODE_18_length_15939_cov_218.787543, whole genome shotgun sequence 15,939
NZ_JALKII010000019.1 Alcanivorax quisquiliarum strain CY1518 NODE_19_length_14945_cov_221.450363, whole genome shotgun sequence 14,945
NZ_JALKII010000020.1 Alcanivorax quisquiliarum strain CY1518 NODE_20_length_6277_cov_221.241129, whole genome shotgun sequence 6,277
NZ_JALKII010000021.1 Alcanivorax quisquiliarum strain CY1518 NODE_21_length_2808_cov_411.984621, whole genome shotgun sequence 2,808
NZ_JALKII010000022.1 Alcanivorax quisquiliarum strain CY1518 NODE_22_length_2422_cov_701.729211, whole genome shotgun sequence 2,422
NZ_JALKII010000023.1 Alcanivorax quisquiliarum strain CY1518 NODE_23_length_2058_cov_7.786471, whole genome shotgun sequence 2,058
NZ_JALKII010000024.1 Alcanivorax quisquiliarum strain CY1518 NODE_25_length_1807_cov_9.132948, whole genome shotgun sequence 1,807
NZ_JALKII010000025.1 Alcanivorax quisquiliarum strain CY1518 NODE_26_length_1799_cov_2.307201, whole genome shotgun sequence 1,799
NZ_JALKII010000026.1 Alcanivorax quisquiliarum strain CY1518 NODE_27_length_1742_cov_427.411411, whole genome shotgun sequence 1,742
NZ_JALKII010000027.1 Alcanivorax quisquiliarum strain CY1518 NODE_28_length_1698_cov_3.615669, whole genome shotgun sequence 1,698
NZ_JALKII010000028.1 Alcanivorax quisquiliarum strain CY1518 NODE_29_length_1654_cov_2.896639, whole genome shotgun sequence 1,654
NZ_JALKII010000029.1 Alcanivorax quisquiliarum strain CY1518 NODE_31_length_1589_cov_2.244048, whole genome shotgun sequence 1,589
NZ_JALKII010000030.1 Alcanivorax quisquiliarum strain CY1518 NODE_33_length_1440_cov_16.728540, whole genome shotgun sequence 1,440
NZ_JALKII010000031.1 Alcanivorax quisquiliarum strain CY1518 NODE_34_length_1326_cov_2.682946, whole genome shotgun sequence 1,326
NZ_JALKII010000032.1 Alcanivorax quisquiliarum strain CY1518 NODE_36_length_1176_cov_1.002730, whole genome shotgun sequence 716
NZ_JALKII010000033.1 Alcanivorax quisquiliarum strain CY1518 NODE_37_length_1165_cov_454.949449, whole genome shotgun sequence 1,165
NZ_JALKII010000034.1 Alcanivorax quisquiliarum strain CY1518 NODE_38_length_1157_cov_3.895370, whole genome shotgun sequence 1,157
NZ_JALKII010000035.1 Alcanivorax quisquiliarum strain CY1518 NODE_39_length_1156_cov_9.465246, whole genome shotgun sequence 1,156
NZ_JALKII010000036.1 Alcanivorax quisquiliarum strain CY1518 NODE_40_length_1148_cov_1.901961, whole genome shotgun sequence 1,148
NZ_JALKII010000037.1 Alcanivorax quisquiliarum strain CY1518 NODE_41_length_1128_cov_1.920076, whole genome shotgun sequence 1,128
NZ_JALKII010000038.1 Alcanivorax quisquiliarum strain CY1518 NODE_42_length_1125_cov_1.739504, whole genome shotgun sequence 1,125
NZ_JALKII010000039.1 Alcanivorax quisquiliarum strain CY1518 NODE_43_length_1119_cov_2.056622, whole genome shotgun sequence 1,119
NZ_JALKII010000040.1 Alcanivorax quisquiliarum strain CY1518 NODE_44_length_1103_cov_8.938596, whole genome shotgun sequence 1,103
NZ_JALKII010000041.1 Alcanivorax quisquiliarum strain CY1518 NODE_48_length_1071_cov_2.121730, whole genome shotgun sequence 1,008
NZ_JALKII010000042.1 Alcanivorax quisquiliarum strain CY1518 NODE_49_length_1053_cov_1.696721, whole genome shotgun sequence 1,053
NZ_JALKII010000043.1 Alcanivorax quisquiliarum strain CY1518 NODE_50_length_1029_cov_1.237395, whole genome shotgun sequence 1,029
NZ_JALKII010000044.1 Alcanivorax quisquiliarum strain CY1518 NODE_51_length_1014_cov_2.041622, whole genome shotgun sequence 1,014

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory