fast.genomicscompare 6,575 genera of bacteria & archaea

 

Caldicoprobacter algeriensis TH7C1

Genome identifier: GCF_023838525.1

NCBI assembly name: ASM2383852v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Caldicoprobacterales, Caldicoprobacteraceae, Caldicoprobacter, Caldicoprobacter algeriensis

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Caldicoprobacteraceae, Caldicoprobacter, Caldicoprobacter algeriensis

Scaffolds: 45

Genes: 2,468 Protein-coding: 2,384 RNAs: 59 pseudogenes: 25

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAHUQD010000001.1 Caldicoprobacter algeriensis strain TH7C1 NODE_1_length_255969_cov_30.311255, whole genome shotgun sequence 255,969
NZ_JAHUQD010000002.1 Caldicoprobacter algeriensis strain TH7C1 NODE_2_length_249151_cov_32.802469, whole genome shotgun sequence 249,151
NZ_JAHUQD010000003.1 Caldicoprobacter algeriensis strain TH7C1 NODE_3_length_211433_cov_35.484345, whole genome shotgun sequence 211,433
NZ_JAHUQD010000004.1 Caldicoprobacter algeriensis strain TH7C1 NODE_4_length_183298_cov_34.602453, whole genome shotgun sequence 183,298
NZ_JAHUQD010000005.1 Caldicoprobacter algeriensis strain TH7C1 NODE_5_length_141023_cov_41.100003, whole genome shotgun sequence 141,023
NZ_JAHUQD010000006.1 Caldicoprobacter algeriensis strain TH7C1 NODE_6_length_124172_cov_55.404265, whole genome shotgun sequence 124,172
NZ_JAHUQD010000007.1 Caldicoprobacter algeriensis strain TH7C1 NODE_7_length_121172_cov_27.676434, whole genome shotgun sequence 121,172
NZ_JAHUQD010000008.1 Caldicoprobacter algeriensis strain TH7C1 NODE_8_length_111117_cov_34.055275, whole genome shotgun sequence 111,117
NZ_JAHUQD010000009.1 Caldicoprobacter algeriensis strain TH7C1 NODE_9_length_91040_cov_41.199047, whole genome shotgun sequence 91,040
NZ_JAHUQD010000010.1 Caldicoprobacter algeriensis strain TH7C1 NODE_10_length_86317_cov_30.743636, whole genome shotgun sequence 86,317
NZ_JAHUQD010000011.1 Caldicoprobacter algeriensis strain TH7C1 NODE_11_length_80299_cov_28.529424, whole genome shotgun sequence 80,299
NZ_JAHUQD010000012.1 Caldicoprobacter algeriensis strain TH7C1 NODE_12_length_78169_cov_26.984649, whole genome shotgun sequence 78,169
NZ_JAHUQD010000013.1 Caldicoprobacter algeriensis strain TH7C1 NODE_13_length_71146_cov_34.773874, whole genome shotgun sequence 71,146
NZ_JAHUQD010000014.1 Caldicoprobacter algeriensis strain TH7C1 NODE_14_length_60249_cov_37.818719, whole genome shotgun sequence 60,249
NZ_JAHUQD010000015.1 Caldicoprobacter algeriensis strain TH7C1 NODE_15_length_59771_cov_41.517789, whole genome shotgun sequence 59,771
NZ_JAHUQD010000016.1 Caldicoprobacter algeriensis strain TH7C1 NODE_16_length_56197_cov_36.283164, whole genome shotgun sequence 56,197
NZ_JAHUQD010000017.1 Caldicoprobacter algeriensis strain TH7C1 NODE_17_length_51767_cov_29.997889, whole genome shotgun sequence 51,767
NZ_JAHUQD010000018.1 Caldicoprobacter algeriensis strain TH7C1 NODE_18_length_51557_cov_39.179953, whole genome shotgun sequence 51,557
NZ_JAHUQD010000019.1 Caldicoprobacter algeriensis strain TH7C1 NODE_19_length_48885_cov_36.446142, whole genome shotgun sequence 48,885
NZ_JAHUQD010000020.1 Caldicoprobacter algeriensis strain TH7C1 NODE_20_length_47143_cov_35.231900, whole genome shotgun sequence 47,143
NZ_JAHUQD010000021.1 Caldicoprobacter algeriensis strain TH7C1 NODE_21_length_46508_cov_46.218559, whole genome shotgun sequence 46,508
NZ_JAHUQD010000022.1 Caldicoprobacter algeriensis strain TH7C1 NODE_22_length_37323_cov_30.786886, whole genome shotgun sequence 37,323
NZ_JAHUQD010000023.1 Caldicoprobacter algeriensis strain TH7C1 NODE_23_length_34717_cov_41.895519, whole genome shotgun sequence 34,717
NZ_JAHUQD010000024.1 Caldicoprobacter algeriensis strain TH7C1 NODE_24_length_30988_cov_33.501798, whole genome shotgun sequence 30,988
NZ_JAHUQD010000025.1 Caldicoprobacter algeriensis strain TH7C1 NODE_25_length_30397_cov_31.541592, whole genome shotgun sequence 30,397
NZ_JAHUQD010000026.1 Caldicoprobacter algeriensis strain TH7C1 NODE_26_length_26500_cov_35.340196, whole genome shotgun sequence 26,500
NZ_JAHUQD010000027.1 Caldicoprobacter algeriensis strain TH7C1 NODE_27_length_25953_cov_25.152676, whole genome shotgun sequence 25,953
NZ_JAHUQD010000028.1 Caldicoprobacter algeriensis strain TH7C1 NODE_28_length_24392_cov_45.574449, whole genome shotgun sequence 24,392
NZ_JAHUQD010000029.1 Caldicoprobacter algeriensis strain TH7C1 NODE_29_length_22322_cov_38.258932, whole genome shotgun sequence 22,322
NZ_JAHUQD010000030.1 Caldicoprobacter algeriensis strain TH7C1 NODE_30_length_22116_cov_44.274183, whole genome shotgun sequence 22,116
NZ_JAHUQD010000031.1 Caldicoprobacter algeriensis strain TH7C1 NODE_31_length_11404_cov_36.737874, whole genome shotgun sequence 11,404
NZ_JAHUQD010000032.1 Caldicoprobacter algeriensis strain TH7C1 NODE_32_length_10837_cov_33.813819, whole genome shotgun sequence 10,837
NZ_JAHUQD010000033.1 Caldicoprobacter algeriensis strain TH7C1 NODE_33_length_5792_cov_373.184113, whole genome shotgun sequence 5,792
NZ_JAHUQD010000034.1 Caldicoprobacter algeriensis strain TH7C1 NODE_34_length_4110_cov_41.304795, whole genome shotgun sequence 4,110
NZ_JAHUQD010000035.1 Caldicoprobacter algeriensis strain TH7C1 NODE_35_length_3595_cov_30.299885, whole genome shotgun sequence 3,595
NZ_JAHUQD010000036.1 Caldicoprobacter algeriensis strain TH7C1 NODE_36_length_3430_cov_38.481683, whole genome shotgun sequence 3,430
NZ_JAHUQD010000037.1 Caldicoprobacter algeriensis strain TH7C1 NODE_37_length_2964_cov_41.730349, whole genome shotgun sequence 2,964
NZ_JAHUQD010000038.1 Caldicoprobacter algeriensis strain TH7C1 NODE_38_length_2425_cov_42.527850, whole genome shotgun sequence 2,425
NZ_JAHUQD010000039.1 Caldicoprobacter algeriensis strain TH7C1 NODE_39_length_1631_cov_85.663564, whole genome shotgun sequence 1,631
NZ_JAHUQD010000040.1 Caldicoprobacter algeriensis strain TH7C1 NODE_40_length_1609_cov_322.371120, whole genome shotgun sequence 1,609
NZ_JAHUQD010000041.1 Caldicoprobacter algeriensis strain TH7C1 NODE_41_length_1476_cov_300.782802, whole genome shotgun sequence 1,476
NZ_JAHUQD010000042.1 Caldicoprobacter algeriensis strain TH7C1 NODE_42_length_1306_cov_267.567430, whole genome shotgun sequence 1,306
NZ_JAHUQD010000043.1 Caldicoprobacter algeriensis strain TH7C1 NODE_43_length_1279_cov_52.847222, whole genome shotgun sequence 1,279
NZ_JAHUQD010000044.1 Caldicoprobacter algeriensis strain TH7C1 NODE_44_length_1277_cov_128.292174, whole genome shotgun sequence 1,277
NZ_JAHUQD010000045.1 Caldicoprobacter algeriensis strain TH7C1 NODE_45_length_797_cov_34.710448, whole genome shotgun sequence 797

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory