fast.genomicscompare 6,575 genera of bacteria & archaea

 

Mesorhizobium_B sp024053505 RP14(2022)

Genome identifier: GCF_024053505.1

NCBI assembly name: ASM2405350v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Mesorhizobium_B, Mesorhizobium_B sp024053505

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Phyllobacteriaceae, Mesorhizobium

Scaffolds: 23

Genes: 4,313 Protein-coding: 4,098 RNAs: 52 pseudogenes: 163

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAMXQS010000001.1 Mesorhizobium sp. RP14(2022) contig1, whole genome shotgun sequence 628,040
NZ_JAMXQS010000002.1 Mesorhizobium sp. RP14(2022) contig2, whole genome shotgun sequence 568,171
NZ_JAMXQS010000003.1 Mesorhizobium sp. RP14(2022) contig3, whole genome shotgun sequence 479,097
NZ_JAMXQS010000004.1 Mesorhizobium sp. RP14(2022) contig4, whole genome shotgun sequence 442,596
NZ_JAMXQS010000005.1 Mesorhizobium sp. RP14(2022) contig5, whole genome shotgun sequence 435,654
NZ_JAMXQS010000006.1 Mesorhizobium sp. RP14(2022) contig6, whole genome shotgun sequence 420,408
NZ_JAMXQS010000007.1 Mesorhizobium sp. RP14(2022) contig7, whole genome shotgun sequence 419,011
NZ_JAMXQS010000008.1 Mesorhizobium sp. RP14(2022) contig8, whole genome shotgun sequence 374,513
NZ_JAMXQS010000009.1 Mesorhizobium sp. RP14(2022) contig9, whole genome shotgun sequence 283,330
NZ_JAMXQS010000010.1 Mesorhizobium sp. RP14(2022) contig10, whole genome shotgun sequence 214,821
NZ_JAMXQS010000011.1 Mesorhizobium sp. RP14(2022) contig11, whole genome shotgun sequence 54,913
NZ_JAMXQS010000012.1 Mesorhizobium sp. RP14(2022) contig12, whole genome shotgun sequence 43,789
NZ_JAMXQS010000013.1 Mesorhizobium sp. RP14(2022) contig13, whole genome shotgun sequence 27,723
NZ_JAMXQS010000014.1 Mesorhizobium sp. RP14(2022) contig14, whole genome shotgun sequence 24,593
NZ_JAMXQS010000015.1 Mesorhizobium sp. RP14(2022) contig15, whole genome shotgun sequence 23,360
NZ_JAMXQS010000016.1 Mesorhizobium sp. RP14(2022) contig16, whole genome shotgun sequence 19,705
NZ_JAMXQS010000017.1 Mesorhizobium sp. RP14(2022) contig17, whole genome shotgun sequence 7,833
NZ_JAMXQS010000018.1 Mesorhizobium sp. RP14(2022) contig18, whole genome shotgun sequence 6,109
NZ_JAMXQS010000019.1 Mesorhizobium sp. RP14(2022) contig19, whole genome shotgun sequence 3,971
NZ_JAMXQS010000020.1 Mesorhizobium sp. RP14(2022) contig20, whole genome shotgun sequence 1,677
NZ_JAMXQS010000021.1 Mesorhizobium sp. RP14(2022) contig21, whole genome shotgun sequence 1,340
NZ_JAMXQS010000022.1 Mesorhizobium sp. RP14(2022) contig22, whole genome shotgun sequence 1,280
NZ_JAMXQS010000023.1 Mesorhizobium sp. RP14(2022) contig23, whole genome shotgun sequence 1,178

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory