fast.genomicscompare 6,575 genera of bacteria & archaea

 

Ensifer_A sp024055895 L1K21

Genome identifier: GCF_024055895.1

NCBI assembly name: ASM2405589v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Ensifer_A, Ensifer_A sp024055895

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Rhizobiaceae, Rhizobium

Scaffolds: 11

Genes: 4,171 Protein-coding: 4,036 RNAs: 51 pseudogenes: 84

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAMXLE010000001.1 Rhizobium sp. L1K21 NODE_1_length_2586907_cov_121.604637, whole genome shotgun sequence 2,586,907
NZ_JAMXLE010000002.1 Rhizobium sp. L1K21 NODE_2_length_514927_cov_128.828667, whole genome shotgun sequence 514,927
NZ_JAMXLE010000003.1 Rhizobium sp. L1K21 NODE_3_length_444639_cov_106.860870, whole genome shotgun sequence 444,639
NZ_JAMXLE010000004.1 Rhizobium sp. L1K21 NODE_4_length_306463_cov_130.646940, whole genome shotgun sequence 306,463
NZ_JAMXLE010000005.1 Rhizobium sp. L1K21 NODE_11_length_189752_cov_80.558509, whole genome shotgun sequence 189,752
NZ_JAMXLE010000006.1 Rhizobium sp. L1K21 NODE_66_length_5883_cov_237.739799, whole genome shotgun sequence 5,883
NZ_JAMXLE010000007.1 Rhizobium sp. L1K21 NODE_113_length_418_cov_69.031348, whole genome shotgun sequence 418
NZ_JAMXLE010000008.1 Rhizobium sp. L1K21 NODE_13_length_10806, whole genome shotgun sequence 10,806
NZ_JAMXLE010000009.1 Rhizobium sp. L1K21 NODE_14_length_158808, whole genome shotgun sequence 158,808
NZ_JAMXLE010000010.1 Rhizobium sp. L1K21 NODE_18_length_7799, whole genome shotgun sequence 7,799
NZ_JAMXLE010000011.1 Rhizobium sp. L1K21 NODE_19_length_110511, whole genome shotgun sequence 110,511

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory