fast.genomicscompare 6,575 genera of bacteria & archaea

 

Futiania mangrovii FT118

Genome identifier: GCF_024158125.1

NCBI assembly name: ASM2415812v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Futianiales, Futianiaceae, Futiania, Futiania mangrovii

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Futianiales, Futianiaceae, Futiania, Futiania mangrovii

Scaffolds: 6

Genes: 3,245 Protein-coding: 3,188 RNAs: 52 pseudogenes: 5

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAMZFT010000001.1 Futiania mangrovi strain FT118 NODE_1_length_1448022_cov_276.526728, whole genome shotgun sequence 1,448,022
NZ_JAMZFT010000002.1 Futiania mangrovi strain FT118 NODE_2_length_1219768_cov_317.618293, whole genome shotgun sequence 1,219,768
NZ_JAMZFT010000003.1 Futiania mangrovi strain FT118 NODE_3_length_440155_cov_277.040184, whole genome shotgun sequence 440,155
NZ_JAMZFT010000004.1 Futiania mangrovi strain FT118 NODE_4_length_282358_cov_314.229654, whole genome shotgun sequence 282,358
NZ_JAMZFT010000005.1 Futiania mangrovi strain FT118 NODE_5_length_5436_cov_549.151894, whole genome shotgun sequence 5,436
NZ_JAMZFT010000006.1 Futiania mangrovi strain FT118 NODE_6_length_1617_cov_593.098701, whole genome shotgun sequence 1,617

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory