fast.genomicscompare 6,575 genera of bacteria & archaea

 

Methanocalculus sp003838185 AMF5

Genome identifier: GCF_024170265.1

NCBI assembly name: ASM2417026v1

GTDB taxonomy: Archaea, Halobacteriota, Methanomicrobia, Methanomicrobiales, Methanocorpusculaceae, Methanocalculus, Methanocalculus sp003838185

NCBI taxonomy: Archaea, Euryarchaeota, Methanomicrobia, Methanomicrobiales, Methanocalculaceae, Methanocalculus

Scaffolds: 25

Genes: 2,007 Protein-coding: 1,908 RNAs: 51 pseudogenes: 48

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JALJXW010000001.1 Methanocalculus sp. AMF5 Ga0466810_01, whole genome shotgun sequence 353,350
NZ_JALJXW010000002.1 Methanocalculus sp. AMF5 Ga0466810_02, whole genome shotgun sequence 301,039
NZ_JALJXW010000003.1 Methanocalculus sp. AMF5 Ga0466810_03, whole genome shotgun sequence 270,049
NZ_JALJXW010000004.1 Methanocalculus sp. AMF5 Ga0466810_04, whole genome shotgun sequence 176,759
NZ_JALJXW010000005.1 Methanocalculus sp. AMF5 Ga0466810_05, whole genome shotgun sequence 149,424
NZ_JALJXW010000006.1 Methanocalculus sp. AMF5 Ga0466810_06, whole genome shotgun sequence 135,778
NZ_JALJXW010000007.1 Methanocalculus sp. AMF5 Ga0466810_07, whole genome shotgun sequence 110,888
NZ_JALJXW010000008.1 Methanocalculus sp. AMF5 Ga0466810_08, whole genome shotgun sequence 80,750
NZ_JALJXW010000009.1 Methanocalculus sp. AMF5 Ga0466810_09, whole genome shotgun sequence 75,429
NZ_JALJXW010000010.1 Methanocalculus sp. AMF5 Ga0466810_10, whole genome shotgun sequence 68,635
NZ_JALJXW010000011.1 Methanocalculus sp. AMF5 Ga0466810_11, whole genome shotgun sequence 68,120
NZ_JALJXW010000012.1 Methanocalculus sp. AMF5 Ga0466810_12, whole genome shotgun sequence 59,130
NZ_JALJXW010000013.1 Methanocalculus sp. AMF5 Ga0466810_13, whole genome shotgun sequence 40,485
NZ_JALJXW010000014.1 Methanocalculus sp. AMF5 Ga0466810_14, whole genome shotgun sequence 18,522
NZ_JALJXW010000015.1 Methanocalculus sp. AMF5 Ga0466810_15, whole genome shotgun sequence 16,672
NZ_JALJXW010000016.1 Methanocalculus sp. AMF5 Ga0466810_16, whole genome shotgun sequence 12,404
NZ_JALJXW010000017.1 Methanocalculus sp. AMF5 Ga0466810_17, whole genome shotgun sequence 4,255
NZ_JALJXW010000018.1 Methanocalculus sp. AMF5 Ga0466810_18, whole genome shotgun sequence 4,047
NZ_JALJXW010000019.1 Methanocalculus sp. AMF5 Ga0466810_19, whole genome shotgun sequence 2,272
NZ_JALJXW010000020.1 Methanocalculus sp. AMF5 Ga0466810_20, whole genome shotgun sequence 2,000
NZ_JALJXW010000021.1 Methanocalculus sp. AMF5 Ga0466810_21, whole genome shotgun sequence 1,901
NZ_JALJXW010000022.1 Methanocalculus sp. AMF5 Ga0466810_22, whole genome shotgun sequence 1,816
NZ_JALJXW010000023.1 Methanocalculus sp. AMF5 Ga0466810_23, whole genome shotgun sequence 1,525
NZ_JALJXW010000024.1 Methanocalculus sp. AMF5 Ga0466810_24, whole genome shotgun sequence 1,514
NZ_JALJXW010000025.1 Methanocalculus sp. AMF5 Ga0466810_25, whole genome shotgun sequence 1,153

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory