fast.genomicscompare 6,575 genera of bacteria & archaea

 

SZUA-540 sp024197615 KJ2020

Genome identifier: GCF_024197615.1

NCBI assembly name: ASM2419761v1

GTDB taxonomy: Bacteria, Desulfobacterota, Desulfuromonadia, Desulfuromonadales, SZUA-540, SZUA-540, SZUA-540 sp024197615

NCBI taxonomy: Bacteria, Thermodesulfobacteriota, Desulfuromonadia, Desulfuromonadales, Desulfuromonadaceae, Desulfuromonas

Scaffolds: 8

Genes: 3,089 Protein-coding: 2,976 RNAs: 65 pseudogenes: 48

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAKUKE010000001.1 Desulfuromonas sp. KJ2020 Desulfo_c1, whole genome shotgun sequence 1,661,692
NZ_JAKUKE010000002.1 Desulfuromonas sp. KJ2020 Desulfo_c2, whole genome shotgun sequence 127,396
NZ_JAKUKE010000003.1 Desulfuromonas sp. KJ2020 Desulfo_c3, whole genome shotgun sequence 1,355,650
NZ_JAKUKE010000004.1 Desulfuromonas sp. KJ2020 Desulfo_c4, whole genome shotgun sequence 129,505
NZ_JAKUKE010000005.1 Desulfuromonas sp. KJ2020 Desulfo_c5, whole genome shotgun sequence 16,163
NZ_JAKUKE010000006.1 Desulfuromonas sp. KJ2020 Desulfo_c6, whole genome shotgun sequence 4,246
NZ_JAKUKE010000007.1 Desulfuromonas sp. KJ2020 Desulfo_rep_c16, whole genome shotgun sequence 1,129
NZ_JAKUKE010000008.1 Desulfuromonas sp. KJ2020 Desulfo_rep_c17, whole genome shotgun sequence 4,775

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory