fast.genomicscompare 6,575 genera of bacteria & archaea

 

CSK15Z-1 sp024519155 CSK15Z-1

Genome identifier: GCF_024519155.1

NCBI assembly name: ASM2451915v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, CSK15Z-1, CSK15Z-1 sp024519155

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Aurantimonadaceae, Aurantimonas

Scaffolds: 15

Genes: 3,901 Protein-coding: 3,704 RNAs: 60 pseudogenes: 137

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JANIFJ010000001.1 Aurantimonas sp. CSK15Z-1 Scaffold1, whole genome shotgun sequence 1,318,335
NZ_JANIFJ010000002.1 Aurantimonas sp. CSK15Z-1 Scaffold2, whole genome shotgun sequence 691,761
NZ_JANIFJ010000003.1 Aurantimonas sp. CSK15Z-1 Scaffold3, whole genome shotgun sequence 460,016
NZ_JANIFJ010000004.1 Aurantimonas sp. CSK15Z-1 Scaffold4, whole genome shotgun sequence 383,039
NZ_JANIFJ010000005.1 Aurantimonas sp. CSK15Z-1 Scaffold5, whole genome shotgun sequence 359,392
NZ_JANIFJ010000006.1 Aurantimonas sp. CSK15Z-1 Scaffold6, whole genome shotgun sequence 260,221
NZ_JANIFJ010000007.1 Aurantimonas sp. CSK15Z-1 Scaffold7, whole genome shotgun sequence 151,917
NZ_JANIFJ010000008.1 Aurantimonas sp. CSK15Z-1 Scaffold8, whole genome shotgun sequence 147,923
NZ_JANIFJ010000009.1 Aurantimonas sp. CSK15Z-1 Scaffold9, whole genome shotgun sequence 130,868
NZ_JANIFJ010000010.1 Aurantimonas sp. CSK15Z-1 Scaffold10, whole genome shotgun sequence 91,354
NZ_JANIFJ010000011.1 Aurantimonas sp. CSK15Z-1 Scaffold11, whole genome shotgun sequence 52,798
NZ_JANIFJ010000012.1 Aurantimonas sp. CSK15Z-1 Scaffold12, whole genome shotgun sequence 42,196
NZ_JANIFJ010000013.1 Aurantimonas sp. CSK15Z-1 Scaffold13, whole genome shotgun sequence 3,767
NZ_JANIFJ010000014.1 Aurantimonas sp. CSK15Z-1 Scaffold14, whole genome shotgun sequence 1,847
NZ_JANIFJ010000015.1 Aurantimonas sp. CSK15Z-1 Scaffold15, whole genome shotgun sequence 1,482

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory