fast.genomicscompare 6,575 genera of bacteria & archaea

 

Rhizobium_E sp024707525 TH2

Genome identifier: GCF_024707525.1

NCBI assembly name: ASM2470752v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, Rhizobium_E, Rhizobium_E sp024707525

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Rhizobiaceae, Rhizobium

Scaffolds: 4

Genes: 6,368 Protein-coding: 6,199 RNAs: 59 pseudogenes: 110

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_CP062231.1 Rhizobium sp. TH2 chromosome, complete genome 5,879,766
NZ_CP062232.1 Rhizobium sp. TH2 plasmid pTH2a, complete sequence 238,315
NZ_CP062233.1 Rhizobium sp. TH2 plasmid pTH2b, complete sequence 223,174
NZ_CP062234.1 Rhizobium sp. TH2 plasmid pTH2c, complete sequence 98,262

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory