fast.genomicscompare 6,575 genera of bacteria & archaea

 

Romboutsia_D lituseburensis_A MY01

Genome identifier: GCF_024723825.1

NCBI assembly name: ASM2472382v1

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Peptostreptococcales, Peptostreptococcaceae, Romboutsia_D, Romboutsia_D lituseburensis_A

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Peptostreptococcaceae, Romboutsia, Romboutsia lituseburensis

Scaffolds: 6

Genes: 3,821 Protein-coding: 3,630 RNAs: 181 pseudogenes: 10

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JANQBQ010000001.1 Romboutsia lituseburensis strain MY01 tig00001, whole genome shotgun sequence 3,788,688
NZ_JANQBQ010000002.1 Romboutsia lituseburensis strain MY01 tig00002, whole genome shotgun sequence 75,830
NZ_JANQBQ010000003.1 Romboutsia lituseburensis strain MY01 tig00003, whole genome shotgun sequence 31,339
NZ_JANQBQ010000004.1 Romboutsia lituseburensis strain MY01 tig00004, whole genome shotgun sequence 23,470
NZ_JANQBQ010000005.1 Romboutsia lituseburensis strain MY01 tig00005, whole genome shotgun sequence 3,251
NZ_JANQBQ010000006.1 Romboutsia lituseburensis strain MY01 tig00006, whole genome shotgun sequence 3,030

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory