fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAFMPW01 sp026126425 Z0-33

Genome identifier: GCF_026126425.1

NCBI assembly name: ASM2612642v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, JAFMPW01, JAFMPW01 sp026126425

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Muriicola

Scaffolds: 49

Genes: 3,658 Protein-coding: 3,605 RNAs: 43 pseudogenes: 10

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAFMPW010000001.1 Muriicola sp. Z0-33 scaffold_1_length=664461, whole genome shotgun sequence 664,460
NZ_JAFMPW010000002.1 Muriicola sp. Z0-33 scaffold_2_length=657239, whole genome shotgun sequence 657,238
NZ_JAFMPW010000003.1 Muriicola sp. Z0-33 scaffold_3_length=357476, whole genome shotgun sequence 357,475
NZ_JAFMPW010000004.1 Muriicola sp. Z0-33 scaffold_4_length=300197, whole genome shotgun sequence 300,196
NZ_JAFMPW010000005.1 Muriicola sp. Z0-33 scaffold_5_length=248688, whole genome shotgun sequence 248,687
NZ_JAFMPW010000006.1 Muriicola sp. Z0-33 scaffold_6_length=247601, whole genome shotgun sequence 247,600
NZ_JAFMPW010000007.1 Muriicola sp. Z0-33 scaffold_7_length=217041, whole genome shotgun sequence 217,040
NZ_JAFMPW010000008.1 Muriicola sp. Z0-33 scaffold_8_length=211227, whole genome shotgun sequence 211,226
NZ_JAFMPW010000009.1 Muriicola sp. Z0-33 scaffold_9_length=176698, whole genome shotgun sequence 176,697
NZ_JAFMPW010000010.1 Muriicola sp. Z0-33 scaffold_10_length=162138, whole genome shotgun sequence 162,137
NZ_JAFMPW010000011.1 Muriicola sp. Z0-33 scaffold_11_length=161352, whole genome shotgun sequence 161,351
NZ_JAFMPW010000012.1 Muriicola sp. Z0-33 scaffold_12_length=82991, whole genome shotgun sequence 82,990
NZ_JAFMPW010000013.1 Muriicola sp. Z0-33 scaffold_13_length=79578, whole genome shotgun sequence 79,577
NZ_JAFMPW010000014.1 Muriicola sp. Z0-33 scaffold_14_length=78589, whole genome shotgun sequence 78,588
NZ_JAFMPW010000015.1 Muriicola sp. Z0-33 scaffold_15_length=71152, whole genome shotgun sequence 71,151
NZ_JAFMPW010000016.1 Muriicola sp. Z0-33 scaffold_16_length=63760, whole genome shotgun sequence 63,759
NZ_JAFMPW010000017.1 Muriicola sp. Z0-33 scaffold_17_length=57084, whole genome shotgun sequence 57,083
NZ_JAFMPW010000018.1 Muriicola sp. Z0-33 scaffold_18_length=53987, whole genome shotgun sequence 53,986
NZ_JAFMPW010000019.1 Muriicola sp. Z0-33 scaffold_19_length=53483, whole genome shotgun sequence 53,482
NZ_JAFMPW010000020.1 Muriicola sp. Z0-33 scaffold_20_length=49114, whole genome shotgun sequence 49,113
NZ_JAFMPW010000021.1 Muriicola sp. Z0-33 scaffold_21_length=31344, whole genome shotgun sequence 31,343
NZ_JAFMPW010000022.1 Muriicola sp. Z0-33 scaffold_22_length=26265, whole genome shotgun sequence 26,264
NZ_JAFMPW010000023.1 Muriicola sp. Z0-33 scaffold_23_length=25542, whole genome shotgun sequence 25,541
NZ_JAFMPW010000024.1 Muriicola sp. Z0-33 scaffold_24_length=11364, whole genome shotgun sequence 11,363
NZ_JAFMPW010000025.1 Muriicola sp. Z0-33 scaffold_25_length=11034, whole genome shotgun sequence 11,033
NZ_JAFMPW010000026.1 Muriicola sp. Z0-33 scaffold_26_length=8907, whole genome shotgun sequence 8,906
NZ_JAFMPW010000027.1 Muriicola sp. Z0-33 scaffold_27_length=7596, whole genome shotgun sequence 7,595
NZ_JAFMPW010000028.1 Muriicola sp. Z0-33 scaffold_28_length=6900, whole genome shotgun sequence 6,899
NZ_JAFMPW010000029.1 Muriicola sp. Z0-33 scaffold_29_length=5576, whole genome shotgun sequence 5,575
NZ_JAFMPW010000030.1 Muriicola sp. Z0-33 scaffold_30_length=3170, whole genome shotgun sequence 3,169
NZ_JAFMPW010000031.1 Muriicola sp. Z0-33 scaffold_31_length=2799, whole genome shotgun sequence 2,798
NZ_JAFMPW010000032.1 Muriicola sp. Z0-33 scaffold_32_length=2580, whole genome shotgun sequence 2,579
NZ_JAFMPW010000033.1 Muriicola sp. Z0-33 scaffold_33_length=1429, whole genome shotgun sequence 1,428
NZ_JAFMPW010000034.1 Muriicola sp. Z0-33 scaffold_34_length=1322, whole genome shotgun sequence 1,321
NZ_JAFMPW010000035.1 Muriicola sp. Z0-33 scaffold_35_length=1042, whole genome shotgun sequence 1,041
NZ_JAFMPW010000036.1 Muriicola sp. Z0-33 scaffold_36_length=846, whole genome shotgun sequence 845
NZ_JAFMPW010000037.1 Muriicola sp. Z0-33 scaffold_37_length=840, whole genome shotgun sequence 839
NZ_JAFMPW010000038.1 Muriicola sp. Z0-33 scaffold_38_length=778, whole genome shotgun sequence 777
NZ_JAFMPW010000039.1 Muriicola sp. Z0-33 scaffold_39_length=726, whole genome shotgun sequence 725
NZ_JAFMPW010000040.1 Muriicola sp. Z0-33 scaffold_40_length=726, whole genome shotgun sequence 725
NZ_JAFMPW010000041.1 Muriicola sp. Z0-33 scaffold_41_length=667, whole genome shotgun sequence 666
NZ_JAFMPW010000042.1 Muriicola sp. Z0-33 scaffold_42_length=644, whole genome shotgun sequence 643
NZ_JAFMPW010000043.1 Muriicola sp. Z0-33 scaffold_43_length=561, whole genome shotgun sequence 560
NZ_JAFMPW010000044.1 Muriicola sp. Z0-33 scaffold_44_length=390, whole genome shotgun sequence 389
NZ_JAFMPW010000045.1 Muriicola sp. Z0-33 scaffold_45_length=366, whole genome shotgun sequence 365
NZ_JAFMPW010000046.1 Muriicola sp. Z0-33 scaffold_46_length=347, whole genome shotgun sequence 346
NZ_JAFMPW010000047.1 Muriicola sp. Z0-33 scaffold_47_length=337, whole genome shotgun sequence 336
NZ_JAFMPW010000048.1 Muriicola sp. Z0-33 scaffold_48_length=335, whole genome shotgun sequence 334
NZ_JAFMPW010000049.1 Muriicola sp. Z0-33 scaffold_49_length=333, whole genome shotgun sequence 332

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory