fast.genomicscompare 6,575 genera of bacteria & archaea

 

Halobium salinum YJ-8-S

Genome identifier: GCF_026586625.1

NCBI assembly name: ASM2658662v1

GTDB taxonomy: Archaea, Halobacteriota, Halobacteria, Halobacteriales, Haloferacaceae, Halobium, Halobium salinum

NCBI taxonomy: Archaea, Euryarchaeota, Halobacteria, Haloferacales, Haloferacaceae, Halobium, Halobium salinum

Scaffolds: 14

Genes: 4,428 Protein-coding: 4,317 RNAs: 61 pseudogenes: 50

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAODIW010000001.1 Halobium salinum strain YJ-8-S platanus_K_default_1, whole genome shotgun sequence 1,267
NZ_JAODIW010000002.1 Halobium salinum strain YJ-8-S platanus_K_default_2, whole genome shotgun sequence 1,267
NZ_JAODIW010000003.1 Halobium salinum strain YJ-8-S platanus_K_default_3, whole genome shotgun sequence 5,685
NZ_JAODIW010000004.1 Halobium salinum strain YJ-8-S platanus_K_default_4, whole genome shotgun sequence 279,542
NZ_JAODIW010000005.1 Halobium salinum strain YJ-8-S platanus_K_default_5, whole genome shotgun sequence 428,036
NZ_JAODIW010000006.1 Halobium salinum strain YJ-8-S platanus_K_default_6, whole genome shotgun sequence 1,634,880
NZ_JAODIW010000007.1 Halobium salinum strain YJ-8-S platanus_K_default_7, whole genome shotgun sequence 104,220
NZ_JAODIW010000008.1 Halobium salinum strain YJ-8-S platanus_K_default_8, whole genome shotgun sequence 1,103,307
NZ_JAODIW010000009.1 Halobium salinum strain YJ-8-S platanus_K_default_9, whole genome shotgun sequence 207,292
NZ_JAODIW010000010.1 Halobium salinum strain YJ-8-S platanus_K_default_10, whole genome shotgun sequence 665,215
NZ_JAODIW010000011.1 Halobium salinum strain YJ-8-S platanus_K_default_11, whole genome shotgun sequence 876
NZ_JAODIW010000012.1 Halobium salinum strain YJ-8-S platanus_K_default_12, whole genome shotgun sequence 1,203
NZ_JAODIW010000013.1 Halobium salinum strain YJ-8-S platanus_K_default_13, whole genome shotgun sequence 27,045
NZ_JAODIW010000014.1 Halobium salinum strain YJ-8-S platanus_K_default_14, whole genome shotgun sequence 1,970

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory