fast.genomicscompare 6,575 genera of bacteria & archaea

 

Thalassococcus_A lentus KCTC 32084

Genome identifier: GCF_028023555.1

NCBI assembly name: ASM2802355v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Thalassococcus_A, Thalassococcus_A lentus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Thalassococcus, Thalassococcus lentus

Scaffolds: 18

Genes: 3,790 Protein-coding: 3,721 RNAs: 49 pseudogenes: 20

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAQIOY010000001.1 Thalassococcus lentus strain KCTC 32084 YCS.24_ctg001, whole genome shotgun sequence 1,043,167
NZ_JAQIOY010000002.1 Thalassococcus lentus strain KCTC 32084 YCS.24_ctg002, whole genome shotgun sequence 816,672
NZ_JAQIOY010000003.1 Thalassococcus lentus strain KCTC 32084 YCS.24_ctg003, whole genome shotgun sequence 750,821
NZ_JAQIOY010000004.1 Thalassococcus lentus strain KCTC 32084 YCS.24_ctg004, whole genome shotgun sequence 273,644
NZ_JAQIOY010000005.1 Thalassococcus lentus strain KCTC 32084 YCS.24_ctg005, whole genome shotgun sequence 1,947
NZ_JAQIOY010000006.1 Thalassococcus lentus strain KCTC 32084 YCS.24_ctg006, whole genome shotgun sequence 192,181
NZ_JAQIOY010000007.1 Thalassococcus lentus strain KCTC 32084 YCS.24_ctg007, whole genome shotgun sequence 169,205
NZ_JAQIOY010000008.1 Thalassococcus lentus strain KCTC 32084 YCS.24_ctg008, whole genome shotgun sequence 168,748
NZ_JAQIOY010000009.1 Thalassococcus lentus strain KCTC 32084 YCS.24_ctg009, whole genome shotgun sequence 158,249
NZ_JAQIOY010000010.1 Thalassococcus lentus strain KCTC 32084 YCS.24_ctg010, whole genome shotgun sequence 150,935
NZ_JAQIOY010000011.1 Thalassococcus lentus strain KCTC 32084 YCS.24_ctg011, whole genome shotgun sequence 53,807
NZ_JAQIOY010000012.1 Thalassococcus lentus strain KCTC 32084 YCS.24_ctg012, whole genome shotgun sequence 51,848
NZ_JAQIOY010000013.1 Thalassococcus lentus strain KCTC 32084 YCS.24_ctg013, whole genome shotgun sequence 42,891
NZ_JAQIOY010000014.1 Thalassococcus lentus strain KCTC 32084 YCS.24_ctg014, whole genome shotgun sequence 2,697
NZ_JAQIOY010000015.1 Thalassococcus lentus strain KCTC 32084 YCS.24_ctg015, whole genome shotgun sequence 2,110
NZ_JAQIOY010000016.1 Thalassococcus lentus strain KCTC 32084 YCS.24_ctg017, whole genome shotgun sequence 1,680
NZ_JAQIOY010000017.1 Thalassococcus lentus strain KCTC 32084 YCS.24_ctg021, whole genome shotgun sequence 1,268
NZ_JAQIOY010000018.1 Thalassococcus lentus strain KCTC 32084 YCS.24_ctg022, whole genome shotgun sequence 1,193

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory