fast.genomicscompare 6,575 genera of bacteria & archaea

 

Sorangium aterium WIWO2

Genome identifier: GCF_028368935.1

NCBI assembly name: ASM2836893v1

GTDB taxonomy: Bacteria, Myxococcota, Polyangia, Polyangiales, Polyangiaceae, Sorangium, Sorangium aterium

NCBI taxonomy: Bacteria, Myxococcota, Polyangiales, Polyangiaceae, Sorangium, Sorangium aterium

Scaffolds: 7

Genes: 10,016 Protein-coding: 9,875 RNAs: 80 pseudogenes: 61

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAQNDK010000001.1 Sorangium aterium strain WIWO2 ctg.000000F, whole genome shotgun sequence 4,030,638
NZ_JAQNDK010000002.1 Sorangium aterium strain WIWO2 ctg.000001F, whole genome shotgun sequence 2,525,385
NZ_JAQNDK010000003.1 Sorangium aterium strain WIWO2 ctg.000002F, whole genome shotgun sequence 1,903,842
NZ_JAQNDK010000004.1 Sorangium aterium strain WIWO2 ctg.000003F, whole genome shotgun sequence 1,820,688
NZ_JAQNDK010000005.1 Sorangium aterium strain WIWO2 ctg.000004F, whole genome shotgun sequence 1,536,810
NZ_JAQNDK010000006.1 Sorangium aterium strain WIWO2 ctg.000005F, whole genome shotgun sequence 1,072,799
NZ_JAQNDK010000007.1 Sorangium aterium strain WIWO2 ctg.000006F, whole genome shotgun sequence 582,319

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory