fast.genomicscompare 6,575 genera of bacteria & archaea

 

DFVG01 sp028561755 HG106

Genome identifier: GCF_028561755.1

NCBI assembly name: ASM2856175v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, DFVG01, DFVG01 sp028561755

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Altibacter

Scaffolds: 25

Genes: 2,961 Protein-coding: 2,913 RNAs: 42 pseudogenes: 6

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAQQTD010000001.1 Altibacter sp. HG106 NODE_1_length_603158_cov_142.387910, whole genome shotgun sequence 603,158
NZ_JAQQTD010000002.1 Altibacter sp. HG106 NODE_2_length_554661_cov_153.222203, whole genome shotgun sequence 554,661
NZ_JAQQTD010000003.1 Altibacter sp. HG106 NODE_3_length_433644_cov_160.554629, whole genome shotgun sequence 433,644
NZ_JAQQTD010000004.1 Altibacter sp. HG106 NODE_4_length_414067_cov_164.848047, whole genome shotgun sequence 414,067
NZ_JAQQTD010000005.1 Altibacter sp. HG106 NODE_5_length_376999_cov_138.332361, whole genome shotgun sequence 376,999
NZ_JAQQTD010000006.1 Altibacter sp. HG106 NODE_6_length_250475_cov_145.060967, whole genome shotgun sequence 250,475
NZ_JAQQTD010000007.1 Altibacter sp. HG106 NODE_7_length_203563_cov_152.553827, whole genome shotgun sequence 203,563
NZ_JAQQTD010000008.1 Altibacter sp. HG106 NODE_8_length_94862_cov_151.911695, whole genome shotgun sequence 94,862
NZ_JAQQTD010000009.1 Altibacter sp. HG106 NODE_9_length_82273_cov_139.474926, whole genome shotgun sequence 82,273
NZ_JAQQTD010000010.1 Altibacter sp. HG106 NODE_10_length_71840_cov_144.381450, whole genome shotgun sequence 71,840
NZ_JAQQTD010000011.1 Altibacter sp. HG106 NODE_11_length_25527_cov_153.796346, whole genome shotgun sequence 25,527
NZ_JAQQTD010000012.1 Altibacter sp. HG106 NODE_12_length_15013_cov_156.708222, whole genome shotgun sequence 15,013
NZ_JAQQTD010000013.1 Altibacter sp. HG106 NODE_13_length_6469_cov_147.866395, whole genome shotgun sequence 6,469
NZ_JAQQTD010000014.1 Altibacter sp. HG106 NODE_14_length_5728_cov_148.741285, whole genome shotgun sequence 5,728
NZ_JAQQTD010000015.1 Altibacter sp. HG106 NODE_15_length_5513_cov_300.588668, whole genome shotgun sequence 5,513
NZ_JAQQTD010000016.1 Altibacter sp. HG106 NODE_17_length_5335_cov_152.954355, whole genome shotgun sequence 5,335
NZ_JAQQTD010000017.1 Altibacter sp. HG106 NODE_18_length_4675_cov_154.735102, whole genome shotgun sequence 4,675
NZ_JAQQTD010000018.1 Altibacter sp. HG106 NODE_19_length_4358_cov_145.021490, whole genome shotgun sequence 4,358
NZ_JAQQTD010000019.1 Altibacter sp. HG106 NODE_20_length_4334_cov_156.627672, whole genome shotgun sequence 4,334
NZ_JAQQTD010000020.1 Altibacter sp. HG106 NODE_21_length_3201_cov_163.101793, whole genome shotgun sequence 3,201
NZ_JAQQTD010000021.1 Altibacter sp. HG106 NODE_22_length_3090_cov_149.548955, whole genome shotgun sequence 3,090
NZ_JAQQTD010000022.1 Altibacter sp. HG106 NODE_23_length_2788_cov_154.310586, whole genome shotgun sequence 2,788
NZ_JAQQTD010000023.1 Altibacter sp. HG106 NODE_24_length_2583_cov_152.203911, whole genome shotgun sequence 2,583
NZ_JAQQTD010000024.1 Altibacter sp. HG106 NODE_25_length_2470_cov_278.711241, whole genome shotgun sequence 2,470
NZ_JAQQTD010000025.1 Altibacter sp. HG106 NODE_26_length_2006_cov_317.324002, whole genome shotgun sequence 2,006

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory