fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAKCWP01 sp028767125 YIM 93263

Genome identifier: GCF_028767125.1

NCBI assembly name: ASM2876712v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Rhizobiaceae, JAKCWP01, JAKCWP01 sp028767125

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Phyllobacteriaceae, Chelativorans

Scaffolds: 27

Genes: 4,072 Protein-coding: 3,953 RNAs: 52 pseudogenes: 67

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAKCWP010000001.1 Chelativorans sp. YIM 93263 Scaffold1, whole genome shotgun sequence 876,518
NZ_JAKCWP010000002.1 Chelativorans sp. YIM 93263 Scaffold2, whole genome shotgun sequence 604,695
NZ_JAKCWP010000003.1 Chelativorans sp. YIM 93263 Scaffold3, whole genome shotgun sequence 557,724
NZ_JAKCWP010000004.1 Chelativorans sp. YIM 93263 Scaffold4, whole genome shotgun sequence 362,794
NZ_JAKCWP010000005.1 Chelativorans sp. YIM 93263 Scaffold5, whole genome shotgun sequence 355,351
NZ_JAKCWP010000006.1 Chelativorans sp. YIM 93263 Scaffold6, whole genome shotgun sequence 261,421
NZ_JAKCWP010000007.1 Chelativorans sp. YIM 93263 Scaffold7, whole genome shotgun sequence 248,673
NZ_JAKCWP010000008.1 Chelativorans sp. YIM 93263 Scaffold8, whole genome shotgun sequence 225,453
NZ_JAKCWP010000009.1 Chelativorans sp. YIM 93263 Scaffold9, whole genome shotgun sequence 185,039
NZ_JAKCWP010000010.1 Chelativorans sp. YIM 93263 Scaffold10, whole genome shotgun sequence 160,205
NZ_JAKCWP010000011.1 Chelativorans sp. YIM 93263 Scaffold11, whole genome shotgun sequence 126,985
NZ_JAKCWP010000012.1 Chelativorans sp. YIM 93263 Scaffold12, whole genome shotgun sequence 86,682
NZ_JAKCWP010000013.1 Chelativorans sp. YIM 93263 Scaffold13, whole genome shotgun sequence 74,193
NZ_JAKCWP010000014.1 Chelativorans sp. YIM 93263 Scaffold14, whole genome shotgun sequence 43,362
NZ_JAKCWP010000015.1 Chelativorans sp. YIM 93263 Scaffold15, whole genome shotgun sequence 39,206
NZ_JAKCWP010000016.1 Chelativorans sp. YIM 93263 Scaffold16, whole genome shotgun sequence 16,578
NZ_JAKCWP010000017.1 Chelativorans sp. YIM 93263 Scaffold17, whole genome shotgun sequence 11,567
NZ_JAKCWP010000018.1 Chelativorans sp. YIM 93263 Scaffold18, whole genome shotgun sequence 1,817
NZ_JAKCWP010000019.1 Chelativorans sp. YIM 93263 Scaffold19, whole genome shotgun sequence 1,705
NZ_JAKCWP010000020.1 Chelativorans sp. YIM 93263 Scaffold20, whole genome shotgun sequence 1,189
NZ_JAKCWP010000021.1 Chelativorans sp. YIM 93263 Scaffold21, whole genome shotgun sequence 1,179
NZ_JAKCWP010000022.1 Chelativorans sp. YIM 93263 Scaffold22, whole genome shotgun sequence 838
NZ_JAKCWP010000023.1 Chelativorans sp. YIM 93263 Scaffold23, whole genome shotgun sequence 822
NZ_JAKCWP010000024.1 Chelativorans sp. YIM 93263 Scaffold24, whole genome shotgun sequence 807
NZ_JAKCWP010000025.1 Chelativorans sp. YIM 93263 Scaffold25, whole genome shotgun sequence 620
NZ_JAKCWP010000026.1 Chelativorans sp. YIM 93263 Scaffold26, whole genome shotgun sequence 449
NZ_JAKCWP010000027.1 Chelativorans sp. YIM 93263 Scaffold27, whole genome shotgun sequence 416

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory