fast.genomicscompare 6,575 genera of bacteria & archaea

 

UBA6796 sp002452815 CAU 1674

Genome identifier: GCF_029222945.1

NCBI assembly name: ASM2922294v1

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, UBA6796, UBA6796 sp002452815

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Paenirhodobacter

Scaffolds: 34

Genes: 3,554 Protein-coding: 3,461 RNAs: 56 pseudogenes: 37

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JARHUH010000001.1 Paenirhodobacter sp. CAU 1674 contig1, whole genome shotgun sequence 466,389
NZ_JARHUH010000002.1 Paenirhodobacter sp. CAU 1674 contig2, whole genome shotgun sequence 438,989
NZ_JARHUH010000003.1 Paenirhodobacter sp. CAU 1674 contig3, whole genome shotgun sequence 424,162
NZ_JARHUH010000004.1 Paenirhodobacter sp. CAU 1674 contig4, whole genome shotgun sequence 311,188
NZ_JARHUH010000005.1 Paenirhodobacter sp. CAU 1674 contig5, whole genome shotgun sequence 291,491
NZ_JARHUH010000006.1 Paenirhodobacter sp. CAU 1674 contig6, whole genome shotgun sequence 279,943
NZ_JARHUH010000007.1 Paenirhodobacter sp. CAU 1674 contig7, whole genome shotgun sequence 265,806
NZ_JARHUH010000008.1 Paenirhodobacter sp. CAU 1674 contig8, whole genome shotgun sequence 196,458
NZ_JARHUH010000009.1 Paenirhodobacter sp. CAU 1674 contig9, whole genome shotgun sequence 193,989
NZ_JARHUH010000010.1 Paenirhodobacter sp. CAU 1674 contig10, whole genome shotgun sequence 176,438
NZ_JARHUH010000011.1 Paenirhodobacter sp. CAU 1674 contig11, whole genome shotgun sequence 133,297
NZ_JARHUH010000012.1 Paenirhodobacter sp. CAU 1674 contig12, whole genome shotgun sequence 56,704
NZ_JARHUH010000013.1 Paenirhodobacter sp. CAU 1674 contig13, whole genome shotgun sequence 44,577
NZ_JARHUH010000014.1 Paenirhodobacter sp. CAU 1674 contig14, whole genome shotgun sequence 44,144
NZ_JARHUH010000015.1 Paenirhodobacter sp. CAU 1674 contig15, whole genome shotgun sequence 42,323
NZ_JARHUH010000016.1 Paenirhodobacter sp. CAU 1674 contig16, whole genome shotgun sequence 42,142
NZ_JARHUH010000017.1 Paenirhodobacter sp. CAU 1674 contig17, whole genome shotgun sequence 40,277
NZ_JARHUH010000018.1 Paenirhodobacter sp. CAU 1674 contig18, whole genome shotgun sequence 26,404
NZ_JARHUH010000019.1 Paenirhodobacter sp. CAU 1674 contig19, whole genome shotgun sequence 24,301
NZ_JARHUH010000020.1 Paenirhodobacter sp. CAU 1674 contig20, whole genome shotgun sequence 15,655
NZ_JARHUH010000021.1 Paenirhodobacter sp. CAU 1674 contig21, whole genome shotgun sequence 15,410
NZ_JARHUH010000022.1 Paenirhodobacter sp. CAU 1674 contig22, whole genome shotgun sequence 13,538
NZ_JARHUH010000023.1 Paenirhodobacter sp. CAU 1674 contig23, whole genome shotgun sequence 9,881
NZ_JARHUH010000024.1 Paenirhodobacter sp. CAU 1674 contig24, whole genome shotgun sequence 6,199
NZ_JARHUH010000025.1 Paenirhodobacter sp. CAU 1674 contig25, whole genome shotgun sequence 6,005
NZ_JARHUH010000026.1 Paenirhodobacter sp. CAU 1674 contig26, whole genome shotgun sequence 5,620
NZ_JARHUH010000027.1 Paenirhodobacter sp. CAU 1674 contig27, whole genome shotgun sequence 5,007
NZ_JARHUH010000028.1 Paenirhodobacter sp. CAU 1674 contig28, whole genome shotgun sequence 2,506
NZ_JARHUH010000029.1 Paenirhodobacter sp. CAU 1674 contig29, whole genome shotgun sequence 2,449
NZ_JARHUH010000030.1 Paenirhodobacter sp. CAU 1674 contig30, whole genome shotgun sequence 1,778
NZ_JARHUH010000031.1 Paenirhodobacter sp. CAU 1674 contig31, whole genome shotgun sequence 1,671
NZ_JARHUH010000032.1 Paenirhodobacter sp. CAU 1674 contig32, whole genome shotgun sequence 1,315
NZ_JARHUH010000033.1 Paenirhodobacter sp. CAU 1674 contig33, whole genome shotgun sequence 1,274
NZ_JARHUH010000034.1 Paenirhodobacter sp. CAU 1674 contig34, whole genome shotgun sequence 1,254

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory