fast.genomicscompare 6,575 genera of bacteria & archaea

 

JAQSVC01 sp029603165 CAA-3

Genome identifier: GCF_029603165.1

NCBI assembly name: ASM2960316v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Flavobacteriales, Flavobacteriaceae, JAQSVC01, JAQSVC01 sp029603165

NCBI taxonomy: Bacteria, Bacteroidota, Flavobacteriia, Flavobacteriales, Flavobacteriaceae, Galbibacter

Scaffolds: 21

Genes: 3,549 Protein-coding: 3,478 RNAs: 47 pseudogenes: 24

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JAQSVC010000001.1 Galbibacter pacificus strain CAA-3 1_length_1092586_cov_438.206401_cov_438.206401, whole genome shotgun sequence 1,092,586
NZ_JAQSVC010000002.1 Galbibacter pacificus strain CAA-3 2_length_871523_cov_413.824116_cov_413.824116, whole genome shotgun sequence 871,523
NZ_JAQSVC010000003.1 Galbibacter pacificus strain CAA-3 3_length_677581_cov_452.546407_cov_452.546407, whole genome shotgun sequence 677,581
NZ_JAQSVC010000004.1 Galbibacter pacificus strain CAA-3 4_length_424557_cov_453.616797_cov_453.616797, whole genome shotgun sequence 424,557
NZ_JAQSVC010000005.1 Galbibacter pacificus strain CAA-3 5_length_320336_cov_434.360380_cov_434.360380, whole genome shotgun sequence 320,336
NZ_JAQSVC010000006.1 Galbibacter pacificus strain CAA-3 6_length_276508_cov_441.660606_cov_441.660606, whole genome shotgun sequence 276,508
NZ_JAQSVC010000007.1 Galbibacter pacificus strain CAA-3 7_length_270988_cov_450.234816_cov_450.234816, whole genome shotgun sequence 270,988
NZ_JAQSVC010000008.1 Galbibacter pacificus strain CAA-3 8_length_52490_cov_469.923199_cov_469.923199, whole genome shotgun sequence 52,490
NZ_JAQSVC010000009.1 Galbibacter pacificus strain CAA-3 9_length_21155_cov_430.463393_cov_430.463393, whole genome shotgun sequence 21,155
NZ_JAQSVC010000010.1 Galbibacter pacificus strain CAA-3 10_length_7842_cov_487.815827_cov_487.815827, whole genome shotgun sequence 7,842
NZ_JAQSVC010000011.1 Galbibacter pacificus strain CAA-3 11_length_5567_cov_1178.376423_cov_1178.376423, whole genome shotgun sequence 5,567
NZ_JAQSVC010000012.1 Galbibacter pacificus strain CAA-3 12_length_4867_cov_466.588285_cov_466.588285, whole genome shotgun sequence 4,867
NZ_JAQSVC010000013.1 Galbibacter pacificus strain CAA-3 13_length_3659_cov_425.144997_cov_425.144997, whole genome shotgun sequence 3,659
NZ_JAQSVC010000014.1 Galbibacter pacificus strain CAA-3 14_length_3552_cov_415.117167_cov_415.117167, whole genome shotgun sequence 3,552
NZ_JAQSVC010000015.1 Galbibacter pacificus strain CAA-3 15_length_1728_cov_933.226509_cov_933.226509, whole genome shotgun sequence 1,728
NZ_JAQSVC010000016.1 Galbibacter pacificus strain CAA-3 16_length_1434_cov_898.970297_cov_898.970297, whole genome shotgun sequence 1,434
NZ_JAQSVC010000017.1 Galbibacter pacificus strain CAA-3 17_length_972_cov_455.957697_cov_455.957697, whole genome shotgun sequence 972
NZ_JAQSVC010000018.1 Galbibacter pacificus strain CAA-3 18_length_700_cov_475.101900_cov_475.101900, whole genome shotgun sequence 700
NZ_JAQSVC010000019.1 Galbibacter pacificus strain CAA-3 19_length_691_cov_945.614035_cov_945.614035, whole genome shotgun sequence 691
NZ_JAQSVC010000020.1 Galbibacter pacificus strain CAA-3 20_length_646_cov_822.030476_cov_822.030476, whole genome shotgun sequence 646
NZ_JAQSVC010000021.1 Galbibacter pacificus strain CAA-3 21_length_579_cov_1199.349345_cov_1199.349345, whole genome shotgun sequence 579

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory