fast.genomicscompare 6,575 genera of bacteria & archaea

 

JARXWG01 sp029893105 PF5-9

Genome identifier: GCF_029893105.1

NCBI assembly name: ASM2989310v1

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Tannerellaceae, JARXWG01, JARXWG01 sp029893105

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Tannerellaceae, Parabacteroides

Scaffolds: 46

Genes: 3,107 Protein-coding: 3,034 RNAs: 55 pseudogenes: 18

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_JARXWG010000001.1 Parabacteroides sp. PF5-9 Ga0505165_01, whole genome shotgun sequence 304,489
NZ_JARXWG010000002.1 Parabacteroides sp. PF5-9 Ga0505165_02, whole genome shotgun sequence 256,888
NZ_JARXWG010000003.1 Parabacteroides sp. PF5-9 Ga0505165_03, whole genome shotgun sequence 222,402
NZ_JARXWG010000004.1 Parabacteroides sp. PF5-9 Ga0505165_04, whole genome shotgun sequence 204,596
NZ_JARXWG010000005.1 Parabacteroides sp. PF5-9 Ga0505165_05, whole genome shotgun sequence 172,639
NZ_JARXWG010000006.1 Parabacteroides sp. PF5-9 Ga0505165_06, whole genome shotgun sequence 147,141
NZ_JARXWG010000007.1 Parabacteroides sp. PF5-9 Ga0505165_07, whole genome shotgun sequence 143,032
NZ_JARXWG010000008.1 Parabacteroides sp. PF5-9 Ga0505165_08, whole genome shotgun sequence 130,120
NZ_JARXWG010000009.1 Parabacteroides sp. PF5-9 Ga0505165_09, whole genome shotgun sequence 113,586
NZ_JARXWG010000010.1 Parabacteroides sp. PF5-9 Ga0505165_10, whole genome shotgun sequence 112,624
NZ_JARXWG010000011.1 Parabacteroides sp. PF5-9 Ga0505165_11, whole genome shotgun sequence 108,154
NZ_JARXWG010000012.1 Parabacteroides sp. PF5-9 Ga0505165_12, whole genome shotgun sequence 106,813
NZ_JARXWG010000013.1 Parabacteroides sp. PF5-9 Ga0505165_13, whole genome shotgun sequence 105,289
NZ_JARXWG010000014.1 Parabacteroides sp. PF5-9 Ga0505165_14, whole genome shotgun sequence 102,908
NZ_JARXWG010000015.1 Parabacteroides sp. PF5-9 Ga0505165_15, whole genome shotgun sequence 102,644
NZ_JARXWG010000016.1 Parabacteroides sp. PF5-9 Ga0505165_16, whole genome shotgun sequence 101,644
NZ_JARXWG010000017.1 Parabacteroides sp. PF5-9 Ga0505165_17, whole genome shotgun sequence 101,353
NZ_JARXWG010000018.1 Parabacteroides sp. PF5-9 Ga0505165_18, whole genome shotgun sequence 99,713
NZ_JARXWG010000019.1 Parabacteroides sp. PF5-9 Ga0505165_19, whole genome shotgun sequence 99,374
NZ_JARXWG010000020.1 Parabacteroides sp. PF5-9 Ga0505165_20, whole genome shotgun sequence 83,866
NZ_JARXWG010000021.1 Parabacteroides sp. PF5-9 Ga0505165_21, whole genome shotgun sequence 69,045
NZ_JARXWG010000022.1 Parabacteroides sp. PF5-9 Ga0505165_22, whole genome shotgun sequence 63,498
NZ_JARXWG010000023.1 Parabacteroides sp. PF5-9 Ga0505165_23, whole genome shotgun sequence 58,718
NZ_JARXWG010000024.1 Parabacteroides sp. PF5-9 Ga0505165_24, whole genome shotgun sequence 57,429
NZ_JARXWG010000025.1 Parabacteroides sp. PF5-9 Ga0505165_25, whole genome shotgun sequence 56,674
NZ_JARXWG010000026.1 Parabacteroides sp. PF5-9 Ga0505165_26, whole genome shotgun sequence 53,494
NZ_JARXWG010000027.1 Parabacteroides sp. PF5-9 Ga0505165_27, whole genome shotgun sequence 50,885
NZ_JARXWG010000028.1 Parabacteroides sp. PF5-9 Ga0505165_28, whole genome shotgun sequence 50,825
NZ_JARXWG010000029.1 Parabacteroides sp. PF5-9 Ga0505165_29, whole genome shotgun sequence 50,524
NZ_JARXWG010000030.1 Parabacteroides sp. PF5-9 Ga0505165_30, whole genome shotgun sequence 47,279
NZ_JARXWG010000031.1 Parabacteroides sp. PF5-9 Ga0505165_31, whole genome shotgun sequence 43,583
NZ_JARXWG010000032.1 Parabacteroides sp. PF5-9 Ga0505165_32, whole genome shotgun sequence 42,452
NZ_JARXWG010000033.1 Parabacteroides sp. PF5-9 Ga0505165_33, whole genome shotgun sequence 41,235
NZ_JARXWG010000034.1 Parabacteroides sp. PF5-9 Ga0505165_34, whole genome shotgun sequence 35,510
NZ_JARXWG010000035.1 Parabacteroides sp. PF5-9 Ga0505165_35, whole genome shotgun sequence 30,541
NZ_JARXWG010000036.1 Parabacteroides sp. PF5-9 Ga0505165_36, whole genome shotgun sequence 28,954
NZ_JARXWG010000037.1 Parabacteroides sp. PF5-9 Ga0505165_37, whole genome shotgun sequence 25,069
NZ_JARXWG010000038.1 Parabacteroides sp. PF5-9 Ga0505165_38, whole genome shotgun sequence 18,363
NZ_JARXWG010000039.1 Parabacteroides sp. PF5-9 Ga0505165_39, whole genome shotgun sequence 16,739
NZ_JARXWG010000040.1 Parabacteroides sp. PF5-9 Ga0505165_40, whole genome shotgun sequence 14,065
NZ_JARXWG010000041.1 Parabacteroides sp. PF5-9 Ga0505165_41, whole genome shotgun sequence 4,113
NZ_JARXWG010000042.1 Parabacteroides sp. PF5-9 Ga0505165_42, whole genome shotgun sequence 3,422
NZ_JARXWG010000043.1 Parabacteroides sp. PF5-9 Ga0505165_43, whole genome shotgun sequence 1,553
NZ_JARXWG010000044.1 Parabacteroides sp. PF5-9 Ga0505165_44, whole genome shotgun sequence 1,489
NZ_JARXWG010000045.1 Parabacteroides sp. PF5-9 Ga0505165_45, whole genome shotgun sequence 1,396
NZ_JARXWG010000046.1 Parabacteroides sp. PF5-9 Ga0505165_46, whole genome shotgun sequence 1,244

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory