fast.genomicscompare 6,575 genera of bacteria & archaea

 

Haliovirga abyssi IC12

Genome identifier: GCF_030295325.1

NCBI assembly name: ASM3029532v1

GTDB taxonomy: Bacteria, Fusobacteriota, Fusobacteriia, Fusobacteriales, Haliovirgaceae, Haliovirga, Haliovirga abyssi

NCBI taxonomy: Bacteria, Fusobacteriota, Fusobacteriia, Fusobacteriales, Haliovirgaceae, Haliovirga, Haliovirga abyssi

Scaffolds: 2

Genes: 2,328 Protein-coding: 2,259 RNAs: 57 pseudogenes: 12

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_AP027059.1 Haliovirga abyssi strain IC12 chromosome, complete genome 2,427,922
NZ_AP027060.1 Haliovirga abyssi strain IC12 plasmid pHIC, complete sequence 297,551

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory