fast.genomicscompare 6,575 genera of bacteria & archaea

 

Xanthomonas_B massiliensis SN8

Genome identifier: GCF_900018785.1

NCBI assembly name: Xanthomonas massiliensis

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, Xanthomonas_B, Xanthomonas_B massiliensis

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Xanthomonadales, Xanthomonadaceae, Xanthomonas, Xanthomonas massiliensis

Scaffolds: 7

Genes: 3,238 Protein-coding: 3,094 RNAs: 63 pseudogenes: 81

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FCOY01000001.1 Xanthomonas massiliensis strain SN8, whole genome shotgun sequence 3,181
NZ_FCOY01000002.1 Xanthomonas massiliensis strain SN8, whole genome shotgun sequence 276,411
NZ_FCOY01000003.1 Xanthomonas massiliensis strain SN8, whole genome shotgun sequence 24,470
NZ_FCOY01000004.1 Xanthomonas massiliensis strain SN8, whole genome shotgun sequence 131,009
NZ_FCOY01000005.1 Xanthomonas massiliensis strain SN8, whole genome shotgun sequence 358,022
NZ_FCOY01000006.1 Xanthomonas massiliensis strain SN8, whole genome shotgun sequence 1,618,547
NZ_FCOY01000007.1 Xanthomonas massiliensis strain SN8, whole genome shotgun sequence 1,278,062

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory