fast.genomicscompare 6,575 genera of bacteria & archaea

 

Saliniramus fredricksonii HL-109

Genome identifier: GCF_900094735.1

NCBI assembly name: IMG-taxon 2634166172 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Beijerinckiaceae, Saliniramus, Saliniramus fredricksonii

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Salinarimonadaceae, Saliniramus, Saliniramus fredricksonii

Scaffolds: 3

Genes: 3,868 Protein-coding: 3,694 RNAs: 70 pseudogenes: 104

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FMBM01000001.1 Saliniramus fredricksonii strain HL-109, whole genome shotgun sequence 1,446,352
NZ_FMBM01000002.1 Saliniramus fredricksonii strain HL-109, whole genome shotgun sequence 2,363,103
NZ_FMBM01000003.1 Saliniramus fredricksonii strain HL-109, whole genome shotgun sequence 375,099

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory