fast.genomicscompare 6,575 genera of bacteria & archaea

 

Lutimaribacter saemankumensis DSM 28010

Genome identifier: GCF_900100005.1

NCBI assembly name: IMG-taxon 2675903213 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Lutimaribacter, Lutimaribacter saemankumensis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Lutimaribacter, Lutimaribacter saemankumensis

Scaffolds: 49

Genes: 3,827 Protein-coding: 3,719 RNAs: 52 pseudogenes: 56

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FNEB01000001.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 948,406
NZ_FNEB01000002.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 490,219
NZ_FNEB01000003.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 363,094
NZ_FNEB01000004.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 278,342
NZ_FNEB01000005.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 273,534
NZ_FNEB01000006.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 272,864
NZ_FNEB01000007.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 243,396
NZ_FNEB01000008.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 176,536
NZ_FNEB01000009.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 173,667
NZ_FNEB01000010.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 142,237
NZ_FNEB01000011.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 62,464
NZ_FNEB01000012.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 50,332
NZ_FNEB01000013.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 46,448
NZ_FNEB01000014.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 35,764
NZ_FNEB01000015.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 25,959
NZ_FNEB01000016.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 22,906
NZ_FNEB01000017.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 16,677
NZ_FNEB01000018.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 14,315
NZ_FNEB01000019.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 13,303
NZ_FNEB01000020.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 12,756
NZ_FNEB01000021.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 11,125
NZ_FNEB01000022.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 9,352
NZ_FNEB01000023.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 8,669
NZ_FNEB01000024.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 8,414
NZ_FNEB01000025.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 7,833
NZ_FNEB01000026.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 6,816
NZ_FNEB01000027.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 6,417
NZ_FNEB01000028.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 6,101
NZ_FNEB01000029.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 5,776
NZ_FNEB01000030.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 5,213
NZ_FNEB01000031.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 3,723
NZ_FNEB01000032.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 3,561
NZ_FNEB01000033.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 3,181
NZ_FNEB01000034.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 2,800
NZ_FNEB01000035.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 2,004
NZ_FNEB01000036.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 1,840
NZ_FNEB01000037.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 1,474
NZ_FNEB01000038.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 1,432
NZ_FNEB01000039.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 1,424
NZ_FNEB01000040.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 1,362
NZ_FNEB01000041.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 1,301
NZ_FNEB01000042.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 1,282
NZ_FNEB01000043.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 1,269
NZ_FNEB01000044.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 1,253
NZ_FNEB01000045.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 1,243
NZ_FNEB01000046.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 1,176
NZ_FNEB01000047.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 1,087
NZ_FNEB01000048.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 1,083
NZ_FNEB01000049.1 Lutimaribacter saemankumensis strain DSM 28010, whole genome shotgun sequence 1,083

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory