fast.genomicscompare 6,575 genera of bacteria & archaea

 

Limimonas halophila DSM 25584

Genome identifier: GCF_900100655.1

NCBI assembly name: IMG-taxon 2654587884 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Kiloniellales, Rhodovibrionaceae, Limimonas, Limimonas halophila

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Rhodovibrionaceae, Limimonas, Limimonas halophila

Scaffolds: 26

Genes: 2,879 Protein-coding: 2,799 RNAs: 63 pseudogenes: 17

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FNCE01000001.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 653,550
NZ_FNCE01000002.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 540,936
NZ_FNCE01000003.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 294,547
NZ_FNCE01000004.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 211,990
NZ_FNCE01000005.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 205,342
NZ_FNCE01000006.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 188,532
NZ_FNCE01000007.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 161,538
NZ_FNCE01000008.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 141,416
NZ_FNCE01000009.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 104,672
NZ_FNCE01000010.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 93,771
NZ_FNCE01000011.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 62,033
NZ_FNCE01000012.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 56,489
NZ_FNCE01000013.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 48,075
NZ_FNCE01000014.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 42,530
NZ_FNCE01000015.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 37,680
NZ_FNCE01000016.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 36,441
NZ_FNCE01000017.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 32,399
NZ_FNCE01000018.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 27,480
NZ_FNCE01000019.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 21,348
NZ_FNCE01000020.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 17,300
NZ_FNCE01000021.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 16,264
NZ_FNCE01000022.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 12,107
NZ_FNCE01000023.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 10,620
NZ_FNCE01000024.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 9,086
NZ_FNCE01000025.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 6,737
NZ_FNCE01000026.1 Limimonas halophila strain DSM 25584, whole genome shotgun sequence 6,478

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory