fast.genomicscompare 6,575 genera of bacteria & archaea

 

Thalassobaculum litoreum DSM 18839

Genome identifier: GCF_900102465.1

NCBI assembly name: IMG-taxon 2599185271 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Thalassobaculales, Thalassobaculaceae, Thalassobaculum, Thalassobaculum litoreum

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodospirillales, Thalassobaculaceae, Thalassobaculum, Thalassobaculum litoreum

Scaffolds: 51

Genes: 5,121 Protein-coding: 5,008 RNAs: 75 pseudogenes: 38

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FNBW01000001.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 686,438
NZ_FNBW01000002.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 424,609
NZ_FNBW01000003.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 419,159
NZ_FNBW01000004.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 343,555
NZ_FNBW01000005.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 335,109
NZ_FNBW01000006.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 320,790
NZ_FNBW01000007.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 309,114
NZ_FNBW01000008.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 282,834
NZ_FNBW01000009.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 255,987
NZ_FNBW01000010.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 239,521
NZ_FNBW01000011.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 201,053
NZ_FNBW01000012.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 173,016
NZ_FNBW01000013.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 160,259
NZ_FNBW01000014.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 148,818
NZ_FNBW01000015.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 140,078
NZ_FNBW01000016.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 139,309
NZ_FNBW01000017.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 128,409
NZ_FNBW01000018.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 120,677
NZ_FNBW01000019.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 99,702
NZ_FNBW01000020.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 83,631
NZ_FNBW01000021.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 75,962
NZ_FNBW01000022.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 48,254
NZ_FNBW01000023.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 24,011
NZ_FNBW01000024.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 22,921
NZ_FNBW01000025.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 22,012
NZ_FNBW01000026.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 20,399
NZ_FNBW01000027.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 16,049
NZ_FNBW01000028.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 13,545
NZ_FNBW01000029.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 12,009
NZ_FNBW01000030.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 11,042
NZ_FNBW01000031.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 9,375
NZ_FNBW01000032.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 8,083
NZ_FNBW01000033.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 7,219
NZ_FNBW01000034.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 6,941
NZ_FNBW01000035.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 6,759
NZ_FNBW01000036.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 6,524
NZ_FNBW01000037.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 5,986
NZ_FNBW01000038.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 5,828
NZ_FNBW01000039.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 4,074
NZ_FNBW01000040.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 3,456
NZ_FNBW01000041.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 3,248
NZ_FNBW01000042.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 2,868
NZ_FNBW01000043.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 2,832
NZ_FNBW01000044.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 2,730
NZ_FNBW01000045.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 1,626
NZ_FNBW01000046.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 1,600
NZ_FNBW01000047.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 1,409
NZ_FNBW01000048.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 1,400
NZ_FNBW01000049.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 1,066
NZ_FNBW01000050.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 1,036
NZ_FNBW01000051.1 Thalassobaculum litoreum DSM 18839, whole genome shotgun sequence 1,036

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory