fast.genomicscompare 6,575 genera of bacteria & archaea

 

Thiohalomonas denitrificans HLD2

Genome identifier: GCF_900102855.1

NCBI assembly name: IMG-taxon 2593339163 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Thiohalomonadales, Thiohalomonadaceae, Thiohalomonas, Thiohalomonas denitrificans

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Chromatiales, Ectothiorhodospiraceae, Thiohalomonas, Thiohalomonas denitrificans

Scaffolds: 28

Genes: 3,291 Protein-coding: 3,192 RNAs: 60 pseudogenes: 39

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FMWD01000001.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 549,585
NZ_FMWD01000002.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 472,089
NZ_FMWD01000003.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 440,385
NZ_FMWD01000004.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 403,851
NZ_FMWD01000005.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 332,871
NZ_FMWD01000006.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 287,415
NZ_FMWD01000007.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 247,863
NZ_FMWD01000008.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 181,117
NZ_FMWD01000009.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 126,470
NZ_FMWD01000010.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 82,202
NZ_FMWD01000011.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 73,022
NZ_FMWD01000012.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 68,453
NZ_FMWD01000013.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 59,708
NZ_FMWD01000014.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 57,380
NZ_FMWD01000015.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 31,461
NZ_FMWD01000016.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 30,233
NZ_FMWD01000017.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 27,962
NZ_FMWD01000018.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 21,411
NZ_FMWD01000019.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 16,104
NZ_FMWD01000020.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 14,215
NZ_FMWD01000021.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 11,422
NZ_FMWD01000022.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 11,367
NZ_FMWD01000023.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 4,534
NZ_FMWD01000024.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 4,373
NZ_FMWD01000025.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 2,738
NZ_FMWD01000026.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 2,075
NZ_FMWD01000027.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 1,829
NZ_FMWD01000028.1 Thiohalomonas denitrificans strain HLD2, whole genome shotgun sequence 1,497

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory