fast.genomicscompare 6,575 genera of bacteria & archaea

 

Filomicrobium insigne CGMCC 1.6497

Genome identifier: GCF_900104305.1

NCBI assembly name: IMG-taxon 2617270918 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Hyphomicrobiaceae, Filomicrobium, Filomicrobium insigne

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Hyphomicrobiaceae, Filomicrobium, Filomicrobium insigne

Scaffolds: 10

Genes: 3,559 Protein-coding: 3,479 RNAs: 56 pseudogenes: 24

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FNJC01000001.1 Filomicrobium insigne strain CGMCC 1.6497, whole genome shotgun sequence 1,309,167
NZ_FNJC01000002.1 Filomicrobium insigne strain CGMCC 1.6497, whole genome shotgun sequence 912,011
NZ_FNJC01000003.1 Filomicrobium insigne strain CGMCC 1.6497, whole genome shotgun sequence 716,009
NZ_FNJC01000004.1 Filomicrobium insigne strain CGMCC 1.6497, whole genome shotgun sequence 487,105
NZ_FNJC01000005.1 Filomicrobium insigne strain CGMCC 1.6497, whole genome shotgun sequence 219,225
NZ_FNJC01000006.1 Filomicrobium insigne strain CGMCC 1.6497, whole genome shotgun sequence 114,066
NZ_FNJC01000007.1 Filomicrobium insigne strain CGMCC 1.6497, whole genome shotgun sequence 45,869
NZ_FNJC01000008.1 Filomicrobium insigne strain CGMCC 1.6497, whole genome shotgun sequence 23,502
NZ_FNJC01000009.1 Filomicrobium insigne strain CGMCC 1.6497, whole genome shotgun sequence 16,923
NZ_FNJC01000010.1 Filomicrobium insigne strain CGMCC 1.6497, whole genome shotgun sequence 3,317

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory