fast.genomicscompare 6,575 genera of bacteria & archaea

 

Eubacterium_C oxidoreducens DSM 3217

Genome identifier: GCF_900104415.1

NCBI assembly name: IMG-taxon 2593339221 annotated assembly

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Lachnospirales, Lachnospiraceae, Eubacterium_C, Eubacterium_C oxidoreducens

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Eubacteriaceae, Eubacterium, Eubacterium oxidoreducens

Scaffolds: 33

Genes: 2,708 Protein-coding: 2,607 RNAs: 58 pseudogenes: 43

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FMXR01000001.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 1,723
NZ_FMXR01000002.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 961
NZ_FMXR01000003.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 194
NZ_FMXR01000004.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 369,158
NZ_FMXR01000005.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 298,027
NZ_FMXR01000006.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 292,926
NZ_FMXR01000007.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 211,329
NZ_FMXR01000008.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 187,706
NZ_FMXR01000009.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 164,326
NZ_FMXR01000010.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 161,125
NZ_FMXR01000011.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 141,164
NZ_FMXR01000012.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 132,128
NZ_FMXR01000013.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 124,220
NZ_FMXR01000014.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 104,531
NZ_FMXR01000015.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 99,271
NZ_FMXR01000016.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 93,198
NZ_FMXR01000017.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 83,446
NZ_FMXR01000018.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 73,906
NZ_FMXR01000019.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 66,998
NZ_FMXR01000020.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 64,188
NZ_FMXR01000021.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 40,887
NZ_FMXR01000022.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 36,383
NZ_FMXR01000023.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 32,001
NZ_FMXR01000024.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 26,317
NZ_FMXR01000025.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 26,370
NZ_FMXR01000026.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 19,401
NZ_FMXR01000027.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 16,128
NZ_FMXR01000028.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 15,639
NZ_FMXR01000029.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 10,803
NZ_FMXR01000030.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 8,030
NZ_FMXR01000031.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 4,658
NZ_FMXR01000032.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 2,820
NZ_FMXR01000033.1 Eubacterium oxidoreducens strain DSM 3217, whole genome shotgun sequence 2,325

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory