fast.genomicscompare 6,575 genera of bacteria & archaea

 

Bacteroides_I ihuae Marseille-P2824T

Genome identifier: GCF_900104585.1

NCBI assembly name: PRJEB16348

GTDB taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Bacteroidaceae, Bacteroides_I, Bacteroides_I ihuae

NCBI taxonomy: Bacteria, Bacteroidota, Bacteroidia, Bacteroidales, Bacteroidaceae, Bacteroides, Bacteroides ihuae

Scaffolds: 6

Genes: 3,329 Protein-coding: 3,223 RNAs: 72 pseudogenes: 34

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FNVX01000001.1 Bacteroides ihuae strain Marseille-P2824T, whole genome shotgun sequence 4,457
NZ_FNVX01000002.1 Bacteroides ihuae strain Marseille-P2824T, whole genome shotgun sequence 92,820
NZ_FNVX01000003.1 Bacteroides ihuae strain Marseille-P2824T, whole genome shotgun sequence 134,226
NZ_FNVX01000004.1 Bacteroides ihuae strain Marseille-P2824T, whole genome shotgun sequence 1,170,108
NZ_FNVX01000005.1 Bacteroides ihuae strain Marseille-P2824T, whole genome shotgun sequence 1,280,517
NZ_FNVX01000006.1 Bacteroides ihuae strain Marseille-P2824T, whole genome shotgun sequence 1,381,573

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory