fast.genomicscompare 6,575 genera of bacteria & archaea

 

Merdimmobilis hominis Marseille-P2769T

Genome identifier: GCF_900104615.1

NCBI assembly name: PRJEB16353

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Oscillospirales, Ruminococcaceae, Merdimmobilis, Merdimmobilis hominis

NCBI taxonomy: Bacteria, Bacillota, Clostridia, Eubacteriales, Oscillospiraceae, Merdimmobilis, Merdimmobilis hominis

Scaffolds: 3

Genes: 2,486 Protein-coding: 2,358 RNAs: 96 pseudogenes: 32

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_LT629937.1 Merdimmobilis hominis strain Marseille-P2769T scaffold00001, whole genome shotgun sequence 2,425
NZ_LT629938.1 Merdimmobilis hominis strain Marseille-P2769T scaffold00002, whole genome shotgun sequence 2,673
NZ_LT629939.1 Merdimmobilis hominis strain Marseille-P2769T scaffold00003, whole genome shotgun sequence 2,575,644

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory