fast.genomicscompare 6,575 genera of bacteria & archaea

 

28-YEA-48 sp900104955 28-YEA-48

Genome identifier: GCF_900104955.1

NCBI assembly name: IMG-taxon 2693429820 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhizobiales, Beijerinckiaceae, 28-YEA-48, 28-YEA-48 sp900104955

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Hyphomicrobiales, Beijerinckiaceae, Beijerinckia

Scaffolds: 2

Genes: 6,028 Protein-coding: 5,936 RNAs: 60 pseudogenes: 32

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FNSI01000001.1 Beijerinckia sp. 28-YEA-48, whole genome shotgun sequence 5,935,066
NZ_FNSI01000002.1 Beijerinckia sp. 28-YEA-48, whole genome shotgun sequence 492,560

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory