fast.genomicscompare 6,575 genera of bacteria & archaea

 

Pseudomonas_K guangdongensis CCTCC 2012022

Genome identifier: GCF_900105885.1

NCBI assembly name: IMG-taxon 2667527223 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Pseudomonadaceae, Pseudomonas_K, Pseudomonas_K guangdongensis

NCBI taxonomy: Bacteria, Pseudomonadota, Gammaproteobacteria, Pseudomonadales, Pseudomonadaceae, Pseudomonas, Pseudomonas guangdongensis

Scaffolds: 1

Genes: 3,000 Protein-coding: 2,879 RNAs: 91 pseudogenes: 30

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_LT629780.1 Pseudomonas guangdongensis strain CCTCC AB 2012022 chromosome I 3,191,154

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory