fast.genomicscompare 6,575 genera of bacteria & archaea

 

Albimonas donghaensis DSM 17890

Genome identifier: GCF_900106695.1

NCBI assembly name: IMG-taxon 2693429856 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Albimonas, Albimonas donghaensis

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Paracoccaceae, Albimonas, Albimonas donghaensis

Scaffolds: 30

Genes: 4,313 Protein-coding: 4,217 RNAs: 53 pseudogenes: 43

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FNMZ01000001.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 1,454,841
NZ_FNMZ01000002.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 797,543
NZ_FNMZ01000003.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 593,400
NZ_FNMZ01000004.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 482,052
NZ_FNMZ01000005.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 300,322
NZ_FNMZ01000006.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 212,189
NZ_FNMZ01000007.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 185,809
NZ_FNMZ01000008.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 182,535
NZ_FNMZ01000009.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 162,202
NZ_FNMZ01000010.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 156,368
NZ_FNMZ01000011.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 147,611
NZ_FNMZ01000012.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 123,341
NZ_FNMZ01000013.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 54,291
NZ_FNMZ01000014.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 50,984
NZ_FNMZ01000015.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 33,921
NZ_FNMZ01000016.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 20,135
NZ_FNMZ01000017.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 16,216
NZ_FNMZ01000018.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 11,526
NZ_FNMZ01000019.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 8,482
NZ_FNMZ01000020.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 5,626
NZ_FNMZ01000021.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 2,495
NZ_FNMZ01000022.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 1,937
NZ_FNMZ01000023.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 1,820
NZ_FNMZ01000024.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 1,605
NZ_FNMZ01000025.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 1,500
NZ_FNMZ01000026.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 1,259
NZ_FNMZ01000027.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 1,174
NZ_FNMZ01000028.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 1,097
NZ_FNMZ01000029.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 1,057
NZ_FNMZ01000030.1 Albimonas donghaensis strain DSM 17890, whole genome shotgun sequence 1,056

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory