fast.genomicscompare 6,575 genera of bacteria & archaea

 

Tepidimicrobium xylanilyticum DSM 23310

Genome identifier: GCF_900106765.1

NCBI assembly name: IMG-taxon 2599185171 annotated assembly

GTDB taxonomy: Bacteria, Bacillota_A, Clostridia, Tissierellales, Tepidimicrobiaceae, Tepidimicrobium, Tepidimicrobium xylanilyticum

NCBI taxonomy: Bacteria, Bacillota, Tissierellia, Tissierellales, Tepidimicrobiaceae, Tepidimicrobium, Tepidimicrobium xylanilyticum

Scaffolds: 38

Genes: 3,079 Protein-coding: 2,997 RNAs: 62 pseudogenes: 20

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FNNG01000001.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 479,365
NZ_FNNG01000002.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 406,213
NZ_FNNG01000003.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 282,750
NZ_FNNG01000004.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 204,688
NZ_FNNG01000005.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 187,430
NZ_FNNG01000006.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 165,790
NZ_FNNG01000007.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 162,671
NZ_FNNG01000008.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 137,046
NZ_FNNG01000009.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 124,564
NZ_FNNG01000010.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 123,591
NZ_FNNG01000011.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 117,918
NZ_FNNG01000012.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 79,905
NZ_FNNG01000013.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 71,013
NZ_FNNG01000014.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 62,870
NZ_FNNG01000015.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 61,343
NZ_FNNG01000016.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 55,600
NZ_FNNG01000017.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 42,624
NZ_FNNG01000018.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 39,501
NZ_FNNG01000019.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 28,748
NZ_FNNG01000020.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 24,076
NZ_FNNG01000021.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 21,324
NZ_FNNG01000022.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 19,256
NZ_FNNG01000023.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 14,913
NZ_FNNG01000024.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 12,316
NZ_FNNG01000025.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 12,301
NZ_FNNG01000026.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 11,828
NZ_FNNG01000027.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 11,704
NZ_FNNG01000028.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 7,476
NZ_FNNG01000029.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 7,195
NZ_FNNG01000030.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 6,519
NZ_FNNG01000031.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 5,422
NZ_FNNG01000032.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 2,767
NZ_FNNG01000033.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 2,743
NZ_FNNG01000034.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 2,619
NZ_FNNG01000035.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 2,012
NZ_FNNG01000036.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 1,715
NZ_FNNG01000037.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 1,616
NZ_FNNG01000038.1 Tepidimicrobium xylanilyticum strain DSM 23310, whole genome shotgun sequence 1,086

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory