fast.genomicscompare 6,575 genera of bacteria & archaea

 

Litoreibacter albidus DSM 26922

Genome identifier: GCF_900107015.1

NCBI assembly name: IMG-taxon 2617270827 annotated assembly

GTDB taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Rhodobacteraceae, Litoreibacter, Litoreibacter albidus

NCBI taxonomy: Bacteria, Pseudomonadota, Alphaproteobacteria, Rhodobacterales, Roseobacteraceae, Litoreibacter, Litoreibacter albidus

Scaffolds: 12

Genes: 3,575 Protein-coding: 3,488 RNAs: 64 pseudogenes: 23

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FNOI01000001.1 Litoreibacter albidus strain DSM 26922, whole genome shotgun sequence 994,906
NZ_FNOI01000002.1 Litoreibacter albidus strain DSM 26922, whole genome shotgun sequence 699,102
NZ_FNOI01000003.1 Litoreibacter albidus strain DSM 26922, whole genome shotgun sequence 397,210
NZ_FNOI01000004.1 Litoreibacter albidus strain DSM 26922, whole genome shotgun sequence 333,596
NZ_FNOI01000005.1 Litoreibacter albidus strain DSM 26922, whole genome shotgun sequence 236,409
NZ_FNOI01000006.1 Litoreibacter albidus strain DSM 26922, whole genome shotgun sequence 193,542
NZ_FNOI01000007.1 Litoreibacter albidus strain DSM 26922, whole genome shotgun sequence 182,956
NZ_FNOI01000008.1 Litoreibacter albidus strain DSM 26922, whole genome shotgun sequence 157,209
NZ_FNOI01000009.1 Litoreibacter albidus strain DSM 26922, whole genome shotgun sequence 155,743
NZ_FNOI01000010.1 Litoreibacter albidus strain DSM 26922, whole genome shotgun sequence 120,921
NZ_FNOI01000011.1 Litoreibacter albidus strain DSM 26922, whole genome shotgun sequence 87,501
NZ_FNOI01000012.1 Litoreibacter albidus strain DSM 26922, whole genome shotgun sequence 21,634

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory