fast.genomicscompare 6,575 genera of bacteria & archaea

 

Halopenitus persicus KCTC 4046;IBRC 10041;DC30

Genome identifier: GCF_900107205.1

NCBI assembly name: IMG-taxon 2654587885 annotated assembly

GTDB taxonomy: Archaea, Halobacteriota, Halobacteria, Halobacteriales, Haloferacaceae, Halopenitus, Halopenitus persicus

NCBI taxonomy: Archaea, Euryarchaeota, Halobacteria, Haloferacales, Haloferacaceae, Halopenitus, Halopenitus persicus

Scaffolds: 27

Genes: 3,409 Protein-coding: 3,247 RNAs: 67 pseudogenes: 95

Tools

BLAST

Search annotations:

Curated BLAST:

Examples: perchlorate or 1.2.1.88

GapMind for amino acid biosynthesis or carbon catabolism (takes 10-40 seconds)

Scaffolds

scaffoldId description length
NZ_FNPC01000001.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 615,241
NZ_FNPC01000002.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 442,956
NZ_FNPC01000003.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 431,026
NZ_FNPC01000004.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 425,941
NZ_FNPC01000005.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 262,814
NZ_FNPC01000006.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 253,786
NZ_FNPC01000007.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 175,657
NZ_FNPC01000008.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 149,377
NZ_FNPC01000009.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 121,574
NZ_FNPC01000010.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 102,057
NZ_FNPC01000011.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 79,033
NZ_FNPC01000012.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 70,200
NZ_FNPC01000013.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 43,525
NZ_FNPC01000014.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 42,475
NZ_FNPC01000015.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 42,313
NZ_FNPC01000016.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 34,351
NZ_FNPC01000017.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 29,333
NZ_FNPC01000018.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 23,522
NZ_FNPC01000019.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 21,116
NZ_FNPC01000020.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 20,795
NZ_FNPC01000021.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 15,272
NZ_FNPC01000022.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 7,395
NZ_FNPC01000023.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 6,179
NZ_FNPC01000024.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 3,455
NZ_FNPC01000025.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 1,816
NZ_FNPC01000026.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 1,660
NZ_FNPC01000027.1 Halopenitus persicus strain DC30,IBRC 10041,KCTC 4046, whole genome shotgun sequence 1,622

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory